KEGG   Shewanella sediminis: Ssed_0779
Entry
Ssed_0779         CDS       T00596                                 
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing)
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
sse  Shewanella sediminis
Brite
KEGG Orthology (KO) [BR:sse00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sse03032]
    Ssed_0779
   03036 Chromosome and associated proteins [BR:sse03036]
    Ssed_0779
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:sse02048]
    Ssed_0779
Enzymes [BR:sse01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     Ssed_0779
DNA replication proteins [BR:sse03032]
 Prokaryotic type
  DNA Topoisomerases
   Ssed_0779
Chromosome and associated proteins [BR:sse03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    Ssed_0779
Prokaryotic defense system [BR:sse02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    Ssed_0779
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C HATPase_c Toprim HATPase_c_3 TOPRIM_C
Other DBs
NCBI-ProteinID: ABV35390
UniProt: A8FRB7
LinkDB
Position
922455..924341
AA seq 628 aa
MTNQYTSDAIEVLNGLDPVKRRPGMYTDTTRPNHLGQEVIDNSVDEALAGHATKIDVILH
KDNSLEVIDDGRGMPVDIHPEEGIPGVELILTKLHAGGKFSNDNYQFSGGLHGVGISVVN
ALSSRVEITVRRNGIVYDMAFEHGHKVEDLVETGTCGRRNSGTRVHFWPTPSYFDFENFS
ISKLVYLLKAKAVLCPGLKIKFVNKQTDEVLEWYYESGLTDYLTSSIKDALMLPEEPFVG
SLKGNLEAVDWAITWLPEGGDYLNESYVNLIPTPLGGTHVNGFRQGLLDSMREFCEFRNL
IPRGIKLTPEDIWDRSSFILSVKMQDPQFSGQTKEKLSSRQSAAFVSGIVRDAFSLWLNT
HTEQAEALAEMCINNAQKRLKSAKKVARKKVTSGPALPGKLTDCSGQDPMRGELFLVEGD
SAGGSAKQARDREFQAIMPLRGKILNTWEVDASQVLASQEVHDISVAIGCDPDCDNISEL
RYGKICILADADSDGLHIATLLCALFMKHYKVLVEHGHIYVAMPPLFRVDVGKEVFYALD
EAEKEGILDRIAAEKKKGKVQVTRFKGLGEMNPLQLRETTMDPNTRRLVQLTVDDAEATI
ALMDMLLAKKRSGDRKTWLETKGDLADF
NT seq 1887 nt   +upstreamnt  +downstreamnt
atgacaaaccaatacacctcagatgccatcgaagtcttaaatgggctcgatccagttaaa
cgccgccctggtatgtataccgataccacgcgtcctaaccacttgggacaagaggttatc
gacaacagtgtcgatgaagcattagcaggacacgcgactaagatcgatgtcatcttgcat
aaagataactctctcgaggttattgatgatggccgagggatgcccgtagatattcaccct
gaagaggggatccctggcgtcgaattgatcttaactaaactgcacgccggcggtaagttc
tcgaatgataactatcaattttcgggtggcttgcatggcgtcgggatctcagtggttaat
gcgttatcgagccgtgtagaaattacggttagacgtaatggcattgtttatgacatggct
ttcgagcacggtcataaggtcgaagaccttgttgaaaccggaacttgtggccgtagaaat
tcaggaactcgagttcacttttggccgactcccagttacttcgattttgaaaatttctct
atttccaagcttgtatacctgttaaaagccaaagcggttttgtgtcccggacttaagatc
aagtttgtgaacaagcaaactgatgaggtcttagagtggtactatgaaagcggattaaca
gattatcttacctcgtcgattaaagatgcactcatgttgcctgaagagccatttgtaggc
agcttgaaggggaatcttgaggcggtagattgggcgataacctggttgcctgagggagga
gattacctcaatgaaagctatgttaacctcattcctaccccactgggggggactcatgtt
aatggtttcaggcagggcttgctcgactccatgcgcgagttctgcgagtttcgtaacctg
atcccaagagggataaaactgacccccgaagatatttgggatcgcagtagctttatttta
tcggtcaagatgcaagaccctcaattttccggacagactaaagagaagttgtcgagtcgc
caaagtgcagcgtttgtttcgggtattgtcagagatgcgtttagtctctggcttaatacc
catactgaacaggccgaagcactcgccgaaatgtgcatcaacaatgcacagaaacgattg
aaatctgcgaagaaagtcgcacgtaagaaggtaacctcgggtccagctctgccaggtaaa
ttaactgactgtagtggccaagatcctatgcgaggagagctattcctggtggagggtgac
tctgcgggaggaagtgctaagcaggctcgagatcgtgagtttcaggcgataatgcccctg
agaggtaaaatcctaaatacttgggaggtcgatgcaagtcaggtactggcatcccaagag
gtacatgatatctcagttgccatagggtgcgatccggattgtgataatatttcagagcta
aggtatggcaaaatatgcatattagccgatgcggattctgatggtttacatattgcgacc
ctgctttgtgctctgtttatgaagcactataaagtgttggttgagcatggacatatctat
gtcgccatgccgcctctgttccgtgtcgatgtggggaaagaggttttttatgccctggat
gaggcggaaaaagagggcatactggatcgaattgcagctgagaagaagaaaggtaaagtt
caggttacccgatttaaaggattgggtgagatgaatccgctgcagttgagggaaacgacg
atggatcccaatactcgtaggttggttcagcttacggtcgatgatgccgaagcgacaatt
gcgctgatggatatgttacttgccaagaaacgctcgggtgatcgaaagacttggttagag
actaaaggtgacttggctgatttttag

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