Shewanella sediminis: Ssed_0795
Help
Entry
Ssed_0795 CDS
T00596
Name
(GenBank) DNA mismatch repair protein MutL
KO
K03572
DNA mismatch repair protein MutL
Organism
sse
Shewanella sediminis
Pathway
sse03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Ssed_0795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sse03400
]
Ssed_0795
DNA repair and recombination proteins [BR:
sse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Molecular matchmaker
Ssed_0795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
ABV35406
UniProt:
A8FRD3
LinkDB
All DBs
Position
943453..945327
Genome browser
AA seq
624 aa
AA seq
DB search
MTIQILPPQLANQIAAGEVVERPASVIKELVENSLDAGATRVDIEIEKGGSKLIKIHDNG
SGISKEDLGLALSRHATSKLSSLDDLDAILSFGFRGEALASISSVSRLTLTSRTADQVEA
WQAYAEGSDMAVKVIPAAHPVGSTVEAVDLFFNTPARRRFLKSDKTEFTHIDEWLKRIAL
VRSDIHFTLKHNGKVVRNYRATNTQDQYLQRLAQISGKKFAEQAIEINCQHDDLKLTGYV
QSPFFETPASDTQYFYVNGRLVRDRLVNHAVRQAFAEHETGEQASYVLMLELDPHQVDVN
VHPAKHEVRFHQSRYVHDYIFQALQSALHQVGRLAIDSDNKLDTDSHSQSHERGHSAYGV
AEPSHSRHDYSHQTAPSTKASTETNRERFSSPISAVPSHTSDVQSRGGATSSYRQQAELP
SAAAIASYAELLKTPDVDQGNRGNKELQANVSMPPILAGQYWVLTQEEQLLLLPVRIIST
WLLQHEISNKLDSGLVSQPLLMPVSISMDETWSDTLAERELLLRKIGIEVTIRLGQLIIK
KVPPYLRQSQLVAVIPDLLQWLRFEEPSNEALASWLAKHDDKRFESAPDTWLAFSQLDDN
VQDELIKKAKVLPWQSWLEEYPSD
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgacaatacagatattaccgccgcaactggcaaaccaaatagcggcgggggaagttgtc
gaaagacccgcctctgtgattaaagagctggttgaaaatagtctggatgcaggtgcaact
cgcgtcgatatagagatcgagaaaggcggcagtaagctgattaaaattcatgacaatggt
tctgggatctcaaaagaagatctaggccttgccctgtctagacatgccacctcaaaactc
agctctctcgatgatcttgacgctatcctcagtttcggatttcgtggtgaggcgttagcg
agtatcagctccgtttcccggttaaccttaacttcccgaacggccgaccaggttgaagct
tggcaagcttatgccgaaggctctgatatggcggtgaaagtgatacctgccgcccatccg
gttggatcgaccgttgaagccgtcgatctgtttttcaatacgcccgcgagaagacgattt
cttaagagtgataaaaccgaattcacgcatatcgatgagtggctaaaacgtattgccttg
gtgcgtagcgatattcactttaccttgaagcacaatggcaaggtggtacgaaactaccgg
gcaacgaacacccaagatcaatatctgcaacgtttagcccagatcagtgggaagaagttt
gctgaacaagcgattgagatcaactgtcaacacgatgatcttaagttaacaggctatgtt
cagtctcctttttttgaaacgccggcgagcgatactcaatatttttatgtcaatggcagg
ttggtacgggacaggctggttaatcacgccgtcaggcaagcatttgccgagcatgaaacc
ggagagcaagcaagctatgtattaatgcttgagctcgatccacatcaggtggatgttaac
gttcacccggctaaacatgaagtcaggtttcatcagagtcgttacgtacatgactatatt
tttcaggccctacagtcggctcttcatcaagtcggtaggttagcaatcgactctgataat
aagctcgataccgattctcattctcagagtcatgagagagggcatagcgcttatggcgtt
gctgagcctagccactcacgacatgattattcacatcagactgcaccaagcaccaaagca
agcacagaaacaaaccgtgagcgcttttcttcacctatttcggctgtgccttctcacacc
agtgatgtgcagagcagaggaggtgcgacttcatcttatcgacagcaagctgaattgccc
agtgccgctgcgatagcatcctatgcagagttattaaagacaccggatgtagatcaaggg
aatagagggaataaggagcttcaagcaaatgtgtcaatgccgccaatcttggcgggtcag
tattgggtcctgactcaggaagagcaactgctgctcctgcctgttagaatcatttcgacc
tggcttttgcaacacgagatctcaaataaactcgatagtggtctggttagccagccatta
ttgatgccggtttctatctctatggacgagacttggagcgatacgctggccgagagggaa
ttattgctcagaaaaataggaattgaagtaacaattcgactggggcagttgattataaag
aaagtgcccccatatttaagacagagccaattagtagctgtcatacctgatttactacag
tggctcaggttcgaagaaccgagtaatgaagcattggcctcctggcttgcaaagcatgac
gataagcgatttgagtctgcaccagatacctggttagcgtttagtcagttagatgacaat
gttcaagatgaactaattaagaaggccaaggttttaccttggcaatcatggctggaagaa
tacccgagtgactga
DBGET
integrated database retrieval system
