Shewanella sediminis: Ssed_0820
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Entry
Ssed_0820 CDS
T00596
Name
(GenBank) putative transcriptional regulator, AsnC family
KO
K03718
Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
Organism
sse
Shewanella sediminis
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sse03000
]
Ssed_0820
Transcription factors [BR:
sse03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
Ssed_0820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
HTH_11
NirdL-like_HTH
HTH_20
MarR_2
HTH_5
HTH_34
MarR
HTH_IclR
DUF4080
B-block_TFIIIC
HTH_Tnp_4
Mga
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
ABV35431
UniProt:
A8FRF8
LinkDB
All DBs
Position
complement(977261..977722)
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AA seq
153 aa
AA seq
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METSFQRDKLDNQILSALMQEARTPFAELAKRFNVSAGTIHVRVEKMKQAGIITGAQITV
NPKALGYDVCCFIGINLKSAGDYPAAISKLNALEEVVEAYYTTGNYSVFVKVMCQSIDGL
QHVLINRIQSIDEIQSTETLISLQNPIVRAVKP
NT seq
462 nt
NT seq
+upstream
nt +downstream
nt
atggaaacatcatttcaaagagataagctcgataaccagatcctatcggcgctgatgcag
gaagccaggacaccattcgccgaactggcaaaacgatttaatgtcagcgcaggtacaatt
catgttcgtgttgagaaaatgaagcaggcggggatcattaccggggcgcaaataaccgta
aacccaaaagcacttggttatgatgtctgttgttttatcgggatcaatttaaaaagcgca
ggcgactatccagccgcgatatctaaactcaatgcgctggaagaggtcgttgaagcttat
tacacaaccggtaactacagcgtatttgtgaaggtaatgtgccaatcgatcgatgggtta
cagcatgtgctaatcaaccgaattcagtctatcgatgagattcaatcgacagaaacctta
attagcctacaaaaccccatcgtcagggctgtaaaaccttag
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