Shewanella sediminis: Ssed_0841
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Entry
Ssed_0841 CDS
T00596
Name
(GenBank) lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
sse
Shewanella sediminis
Pathway
sse00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Ssed_0841
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sse01007
]
Ssed_0841
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sse03016
]
Ssed_0841
Enzymes [BR:
sse01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
Ssed_0841
Amino acid related enzymes [BR:
sse01007
]
Aminoacyl-tRNA synthetase
Class II (A)
Ssed_0841
Transfer RNA biogenesis [BR:
sse03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Ssed_0841
Prokaryotic type
Other AARSs
Ssed_0841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
ABV35452
UniProt:
A8FRH9
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All DBs
Position
1001438..1002940
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AA seq
500 aa
AA seq
DB search
MTEQVQDENKLIAERRAKLEHIRENCPANGHPNTFDRKHKAADIQAEFGNNTKEELEGMG
IVRSIAGRVMAKRGPFLVIQDVSGRIQAYAGKDVQKDLKAKFQGLDIGDIIGVTGQLHLS
GKGDLYVNMEEYELLTKALRPLPEKFHGLTDQETRYRQRYIDLIVNEESREAFIMRSKVV
SAIRNFMVKKEFMEVETPMMHTIPGGASARPFETHHNALDIAMYLRIAPELYLKRLVVGG
FERVFEINRNFRNEGLSPRHNPEFTMMEFYMAYSDYKDLMDLTEEMLSSIATELCGSPKL
PYGEHVVDFGGPYARLSMLDAIKKYNPDNATIQSMTYEEVKDVEFMRNLAKSLGMTIEKF
WTCGQLLEEIFGETAETQLMQPTFITGYPADISPLARRNDDNHFITDRFEFFIGGREVAN
GFSELNDAEDQDNRFKAQVDAKDAGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVML
FTNTHTIRDVILFPAMRPQG
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacaagtacaagatgagaataaattaattgcagagcgacgtgccaagcttgag
cacattcgtgaaaactgccctgcaaatggtcacccgaataccttcgatcgtaaacacaaa
gcggcagacattcaggctgaatttggtaataacaccaaagaagagcttgaaggcatgggc
attgtgcgcagtatcgctggccgtgtcatggcaaagcgtggtcctttcctggtcattcaa
gatgtcagtggacgcattcaggcctatgccggaaaagatgttcaaaaagatcttaaagct
aagttccagggcttagatattggtgacattatcggcgtgactggtcagcttcacctgtcg
ggtaaaggcgatctttatgtgaacatggaagagtatgagttgctgacaaaggcgctacgt
ccattgcctgaaaagttccacggtctaactgaccaggagacgcgttaccgtcagcgttac
atcgatctgatcgttaatgaagagtctcgtgaagccttcataatgcgctcaaaggtggtt
tctgctattcgtaacttcatggttaagaaagagttcatggaagttgaaacgcctatgatg
cacaccattcctggtggcgcttcggctcgtccgtttgaaacgcatcacaatgcactcgat
atcgctatgtatcttcgaattgcaccagagctttaccttaaacgtcttgttgttggcggc
ttcgagcgtgtgttcgaaattaaccgtaacttccgtaacgaaggtttgtcgccacgccat
aacccagagttcactatgatggaattctatatggcgtattcagattataaagatctgatg
gatcttaccgaagagatgctaagttctattgccaccgaactgtgtggttctccaaaactg
ccatacggtgagcatgttgttgactttggtggtccatatgcacgtttaagcatgttggat
gcaatcaagaagtacaacccggacaacgccactattcagtctatgacttacgaagaagtg
aaagacgttgaatttatgcgtaacctggctaagagcctgggcatgactatcgagaagttc
tggacctgtggtcagcttcttgaagagatcttcggtgaaaccgctgagactcagcttatg
cagcctacctttattaccggttaccctgcggatatctcaccgcttgcacgtcgtaatgac
gataaccatttcatcactgaccgtttcgagtttttcatcggcggccgtgaagtcgctaat
ggtttctctgagctcaacgatgcagaagatcaagacaaccgcttcaaggcacaggtcgat
gcaaaagatgccggtgatgatgaagctatgttctatgatgcagattacattactgcgcta
gagcacggtctaccaccaactgcgggtcaaggtatcggaatcgatcgtctggtgatgtta
tttacgaacactcacacgattcgtgacgtgatcctgttcccggctatgcgtcctcagggg
tag
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