Shewanella sediminis: Ssed_0847
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Entry
Ssed_0847 CDS
T00596
Name
(GenBank) peptidase U32
KO
K24847
23S rRNA 5-hydroxycytidine C2501 synthase
Organism
sse
Shewanella sediminis
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sse01002
]
Ssed_0847
Peptidases and inhibitors [BR:
sse01002
]
Peptidases of unknown catalytic type
Family U32
Ssed_0847
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_U32
DUF3656
DUF4172
Motif
Other DBs
NCBI-ProteinID:
ABV35458
UniProt:
A8FRI5
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Position
1009951..1011867
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AA seq
638 aa
AA seq
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MSKAAIFTPDDISHISNRLELLAPAKNAEFGMEAILHGADAVYIGGPDFGARATAGNSVE
DIARLCSFAHKYHAQVFVALNTILMDDELADAEKLIWQLYEAGADALIVQDMGVLQLDLP
PIALHASTQMDNRTAEKAVFLEQVGFSQVVLARELGLSQIREVAAHTKMQLEFFIHGALC
VAYSGLCNLSHAFSNRSANRGECSQMCRLPGELKTRQGEVLAENEHLLSLKDNNQTDNLE
ALIDAGVRSFKIEGRLKDINYVKNVTAHYRQELDKIIARRPELKASSHGRSVHNFTPNPE
KTFNRGRTDYFVHERSQGVSDFRSPKYIGEEVATVKALGKDYIEVNSTHSFNNGDGLCYF
PANYASAKQSDDKLRGLRLNRAEGNKLHVLAVPGDLEVGMTIYRNRDQAFEAVLAKESSK
RSIEVDIKLTDTADGIMLTMTDIYGHQGVVTLALDKQAANEPESAGAKLRKQLGKLGSTD
FVAREITVETEQVWFAPASVINGLRRDAVAALEQARVDEYQRPQPWKHNQNAMYPTKHLS
YLANVANQKSKDFYQQHGVIEIEDTYEKNGITEEVPLMVTKHCLRFNFNLCPKEVPGIKA
DPMVLEIGKDVLKLVFDCPKCEMMVVGANRQVKSDGRG
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagctgccatctttacccccgatgatatctcgcatatatcgaaccgattagaa
ctgcttgccccggctaaaaatgccgaatttggtatggaagcgattcttcatggtgccgat
gcggtctatatcggtggccctgattttggcgctcgtgcaacggcgggcaatagcgtggaa
gatatcgccaggctgtgcagttttgcccataaataccatgctcaggtgtttgtcgccctc
aataccatcttgatggatgatgagctggccgatgctgaaaagttgatctggcagctctat
gaagccggcgccgatgccctcatcgtacaggatatgggggtactgcagctcgaccttcct
cctatcgcgttgcatgccagcacccagatggataaccgcaccgccgaaaaagcggttttt
cttgagcaggttggtttctctcaggtcgtactggctcgcgaactggggctgagtcagata
cgcgaagtggccgctcataccaagatgcaactcgagttcttcattcatggagccctgtgt
gtggcttacagtggtctgtgtaacttaagtcatgcattcagtaatcgcagcgctaaccga
ggtgaatgctcacagatgtgtcgtcttccgggcgagcttaagacccgtcagggcgaggta
cttgccgaaaatgagcatctgctatcgctaaaggataataatcagaccgataaccttgaa
gccttgatcgatgccggtgtgcgctcatttaaaattgaaggccgactcaaagatatcaac
tatgtgaaaaacgtgaccgcccattacaggcaggagttggacaagatcatcgcccgacgt
ccggaattgaaagcctcatcacatgggcgcagcgtgcataacttcactccaaatccggag
aagacctttaaccgtggacgaacggattactttgttcatgagcgcagtcagggggtcagt
gattttcgctcaccaaaatatatcggtgaagaggtcgccaccgttaaggccttaggcaaa
gattacatcgaggttaactctacccatagttttaataatggtgatggcttatgttacttc
cccgccaactatgccagtgccaagcagtccgatgataagctgagagggttacgactcaat
cgcgccgaaggtaataaactgcatgtattggctgtgccaggcgatcttgaagtgggtatg
actatctatcgtaaccgagatcaggctttcgaggcggtgttagccaaagagtcatcgaag
cgctctatcgaagtcgatattaagctgacagacaccgcagatggcatcatgctgacaatg
acagatatctatggtcatcagggcgtggtgactctggctttagataaacaggctgccaat
gaaccagaaagcgctggagcaaagctacgtaaacagttaggaaaacttggcagtaccgat
tttgttgcccgtgagatcactgtcgagactgagcaagtttggtttgcgcctgcctcggtg
attaacggacttcgccgtgatgcggtagcggcgctcgagcaagcacgagtcgatgagtat
caaaggccacagccttggaagcataatcaaaacgccatgtatccgaccaagcaccttagt
tacctggctaatgtggccaatcaaaaatcgaaagatttctatcagcagcatggtgtgatt
gagattgaggatacctatgagaagaacggtatcaccgaagaggtcccattgatggtgact
aaacactgcttgcgcttcaacttcaacctctgtccaaaagaggtgcctggcataaaggct
gatcctatggtacttgagataggtaaagatgtattaaagctggttttcgactgccctaag
tgtgaaatgatggtggtcggcgccaatcgccaggtgaagagcgacggcagaggctag
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