Shewanella sediminis: Ssed_0915
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Entry
Ssed_0915 CDS
T00596
Name
(GenBank) tetratricopeptide TPR_2 repeat protein
KO
K09859
uncharacterized protein
Organism
sse
Shewanella sediminis
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99997 Function unknown
Ssed_0915
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Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_8
TPR_1
Nkap_C
DUF5612
TPR_11
Motif
Other DBs
NCBI-ProteinID:
ABV35526
UniProt:
A8FRQ3
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Position
complement(1095870..1097237)
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AA seq
455 aa
AA seq
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MKKWLLLPLLSLLVSGCALNSIFINYPSQIAPVKAQLNTSTPIKGVLEVESNISGADGLL
YAQEAGRVAQISGDFEASKKYYQQAVTGYLKFDDKATLSVTDMGATASSLFINDNVIPYR
GPGFERVMLHQYQALNYIFSGDQQGALVEVRRSNDLQSSEQARYQKSNESVQAMANGTID
AEVNKLGKAAGTVTSSFLNAYSYYTTGVLHEILGEPNDAFIDYRKAAQISPDNPYLQKDL
VRLAKQLSMPQAGEFERRWGKAITAKKDQGEVIFLIERGFVPEKQSLTVPFTIHGNWQTA
SLATYTSNSRPVSPGKIKGLGKNLTAAPIANLDALAITALKEELPAALIRQAARVYAKSE
MARSVESDSKKRHNETDIAVIAMQIFNVVTEQADRRSWLTLPKQAQIARTYLNNGSYSVQ
LDNGTPAQVEVKSGRTTLVWAVDTGNYTRFYSIII
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagtggctactgctccctctgctcagccttttagtcagtggctgtgcactgaac
agcatttttattaactatccctcacaaattgctccagttaaagcacagctcaataccagt
acccctatcaaaggtgtactcgaggtcgaatccaatatctccggcgccgatggactcctg
tacgcgcaggaagccgggcgggtggcacagatcagcggcgactttgaagcgagtaaaaaa
tactaccagcaagccgttaccggttaccttaagtttgacgacaaggccaccttgagtgtc
accgatatgggagcaactgccagcagcctatttattaacgacaatgtgatcccctaccgt
ggaccaggcttcgagcgtgtgatgcttcaccaatatcaggcgttaaactatatttttagt
ggcgatcaacagggcgcattagtcgaggtgagacgcagtaatgatctgcaaagctccgag
caagccagataccaaaaatcgaatgagtcggttcaagctatggctaacggcactatagac
gccgaagtcaacaaactcggaaaggcggctggcactgtcacgagttcatttcttaacgcc
tatagctattacacgactggcgtattgcatgagatcttaggcgagcctaacgatgcattt
atcgattaccgtaaagccgcacagatatcgccggataatccctacctgcaaaaagatctg
gtgagactggcgaaacagctatctatgccgcaggcgggtgagttcgaacgtcgctggggt
aaagcgataacagcaaagaaagatcagggtgaggtcatattcttaattgaacgtgggttt
gtacctgaaaaacaaagcttaaccgtaccatttaccattcacggtaactggcaaacagcc
tcacttgccacctatacttctaactctcgccccgtatctccgggcaagataaagggatta
ggcaagaacctgactgcggcacccattgcgaacttagatgccttagctattacggcactc
aaagaggagctacccgccgcactcattcgtcaggctgcacgagtttatgcaaagtcagag
atggccagaagtgtagagagtgactcgaagaagcgtcataacgaaaccgatatcgcagtc
attgcgatgcagatctttaatgtcgtcacagagcaagccgatagacgtagctggctcacg
cttcccaagcaggctcaaatagcaagaacctatctcaataatggcagttattcggttcaa
ctggacaatggcactcccgctcaggtagaggtaaaaagtggaagaacgacactggtttgg
gcagtagacactggaaattacacacgtttttattcaataatcatctaa
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