Shewanella sediminis: Ssed_0923
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Entry
Ssed_0923 CDS
T00596
Name
(GenBank) polysaccharide deacetylase
KO
K13014
undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-]
Organism
sse
Shewanella sediminis
Pathway
sse00541
Biosynthesis of various nucleotide sugars
sse01100
Metabolic pathways
sse01503
Cationic antimicrobial peptide (CAMP) resistance
Module
sse_M00761
Und-P-alpha-L-Ara4N biosynthesis, UDP-Glc => UDP-L-Ara4FN => Und-P-alpha-L-Ara4N
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Ssed_0923
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
Ssed_0923
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GFIT
Motif
Pfam:
Polysacc_deac_1
DUF2334
Motif
Other DBs
NCBI-ProteinID:
ABV35534
UniProt:
A8FRR1
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All DBs
Position
complement(1103832..1104749)
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AA seq
305 aa
AA seq
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MSQQNVTKVGLRIDVDTYRGTRLGVPKLLEIFQRHDISASFFFTVGPDNMGRHIWRLLRP
AFLKKMLRSKAASLYGWDILIRGTLWPGPIIGKKLAHIIKQADDAGHEIGLHAWDHHKWQ
MKTDVMTPAELHSEIDKGYQLLSTLTGKPIPCSAVAGWRCTDATLEQKQRFGFRYNSDCR
GESIFIPQLGMAPQIPVTLPTYDELVGKDNIDHSNYNAEIIKLVNPDGLNVYTIHAEVEG
IVCAQLFEELIIQAKENNIEFVPMIELLDHEDIDWPLDEILNIEIDGREGWLSHQASMIN
KQKSA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgagccaacaaaacgtaactaaggtcggtcttaggatcgacgttgatacctatcgaggc
actcgtttaggagtgcctaagctgctggaaattttccagcggcacgatatctcggcgtct
ttcttcttcaccgtcggccccgacaacatggggcgtcatatctggcgtcttctgcgcccg
gcattcctaaaaaagatgctgcgttctaaagcggcaagcttatatggatgggatatatta
attcgtggcactctgtggcccggtcccatcataggtaagaagctagcccatatcatcaaa
caagccgatgatgcaggccatgaaatcggacttcatgcctgggatcaccacaagtggcag
atgaaaacagatgtgatgacccctgcagagcttcacagcgaaatcgacaaaggttatcag
ctgttatctacgctcaccggcaagcctattccctgcagtgcagtcgctggctggcgctgt
accgatgccaccttagagcagaagcaacgctttggatttcgttataacagcgattgcaga
ggggagtcgatatttatcccacagctgggaatggcacctcaaatcccggtgactttgcct
acctatgatgagctggttggtaaagacaacatagatcactctaattacaatgcagagata
atcaaactggtcaatcccgatggtttaaatgtctataccatacatgcagaggttgaaggc
attgtttgcgctcagctatttgaagagcttattatccaggctaaagaaaataatatcgag
ttcgtccccatgatagagctcttggatcatgaagatattgactggcctctggatgagatc
ctcaatattgagatcgatggacgtgaaggctggttaagccatcaagcttcgatgataaat
aaacaaaaaagtgcttaa
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