Shewanella sediminis: Ssed_0939
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Entry
Ssed_0939 CDS
T00596
Name
(GenBank) ABC transporter-related protein
KO
K24821
ATP-binding cassette, subfamily B, heavy metal transporter
Organism
sse
Shewanella sediminis
Pathway
sse02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Ssed_0939
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sse02000
]
Ssed_0939
Transporters [BR:
sse02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Ssed_0939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_29
AAA_16
AAA_21
RsgA_GTPase
SbcC_Walker_B
ATP-synt_ab
DUF87
DUF815
AAA_15
AAA_10
AAA_24
PRK
Roc
AAA_23
YobI-ATPase
Motif
Other DBs
NCBI-ProteinID:
ABV35550
UniProt:
A8FRS7
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All DBs
Position
1121661..1123433
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AA seq
590 aa
AA seq
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MRPSLYFDGPIDKLNWKVLKLLWPYLFEFKSRVGLAMLCLIIAKIASVTLPFVLKSLVDT
LSSASTEQMISVPIALVIAYGSLRLLNTLISEVRDTLFGRVTERAIRRLGLSVFEHLHRL
DLEFHLERRTGGLSRDIERGTSGINFLMRFMVFNIVPTILEIALVVGILFYNYGIAFAAI
TLASVAAYGLFSIFATEWRTEFVREAARADSRSNSRAIDSLLNYETVKYFNNETYEANRY
DCALADWEDAKRKNRLSLFALNAGQALIISVAMTLMLALAAYHVVENTMTIGDFVLVNAF
MMQLFIPLNFLGFVYREIRGALANIERMFGLLDRVPLIEDKADAKDIKLSRGELKFDKVS
FSYDTRPILNSVSFTVLPGQKIAIVGDSGAGKSTIVKLLFRFYEVSSGSISLDGVKIDEL
TQDALRQAIAIVPQDTVLFNDSLLENVRYGRPDASDEEIAAAVKMAHLSHFIEALPDGWH
TKVGERGLKLSGGEKQRVAIARAILKGSPLLVFDEATSSLDSHSEQAILNALKEVAKGHT
SLVIAHRLSTIVDADQIVVLSKGKVVETGDHLSLLANNGLYARLWNIQNQ
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccttctctctattttgatggccctatcgataaactgaattggaaagtccttaag
ttgctctggccgtatcttttcgagttcaaatcgcgagtgggcttagccatgctgtgcttg
attattgccaaaatcgccagcgttactctgccatttgtattgaagtcattggtcgacact
ttaagttcggcatcgactgagcagatgataagcgtgccgatagcccttgttatcgcttat
ggttcattacgattactgaataccttgatctctgaggtgagggatacgctgtttggcaga
gtaaccgagcgtgcaattaggcggttagggctgtccgtttttgaacatctgcatcgatta
gatctagagtttcacctagagcgaaggaccggtggcttatccagagatatagagagaggc
accagtggcattaattttttgatgcgatttatggtgttcaatatcgtgccaacaattctg
gagatagccttggttgttgggatcctgttttataattatggtatagcattcgctgcgata
acgttagcttcggtggcggcatatggactattttccatttttgcgaccgagtggagaacg
gagtttgttcgtgaagccgccagggctgattctcgatccaactctcgtgcgatcgatagc
cttcttaattatgaaacagtaaaatattttaataatgaaacctatgaagctaatcgctac
gactgtgcattagccgactgggaagatgcaaagcgaaaaaaccgcctgtctctttttgca
ctaaatgccggacaagcgttaatcatctctgttgctatgacgttaatgttagctctcgca
gcttaccatgttgttgaaaatacgatgactataggtgattttgtattggttaatgcgttt
atgatgcaactttttataccacttaatttcttaggttttgtctatcgcgaaatccggggg
gcactggctaatattgagagaatgtttggcctgttggatcgcgtacctcttatcgaggat
aaagccgatgctaaagatattaagctttcgcgtggagaactgaagtttgacaaggtgagt
tttagttacgataccaggcctattttgaatagtgttagctttacagtcttgccagggcag
aagattgcaatcgtgggtgatagtggcgcaggtaagtcgaccatagttaaactactcttt
cgtttttatgaggtgtcatcggggagtatttctctggacggcgtaaaaattgatgaatta
acccaggacgcgttacgacaagctattgctattgtgcctcaagacacggttttatttaat
gactccctgttagaaaatgttcgctatggtagacccgatgcgagtgatgaggagatcgcg
gcagcggttaagatggctcacctttctcattttattgaggctctgcccgatgggtggcat
acaaaggtgggggaaagaggcttaaagttatccggtggagagaaacagcgagtcgctatt
gccagagccatactcaagggctcccctctgctggtatttgatgaggcaacgtcttctctg
gatagccattctgaacaggcgatattgaatgccttgaaagaggtggcaaaaggccatacc
agtttggttatcgcgcaccgtctgtctaccattgtcgatgcagatcaaattgtggtgttg
agtaaaggcaaggttgttgaaacaggtgatcacctatctctgttagccaataatggtttg
tatgcgagactgtggaatattcaaaatcaatga
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