Shewanella sediminis: Ssed_0973
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Entry
Ssed_0973 CDS
T00596
Name
(GenBank) Phosphoribosylaminoimidazole carboxylase
KO
K08289
phosphoribosylglycinamide formyltransferase 2 [EC:
6.3.1.21
]
Organism
sse
Shewanella sediminis
Pathway
sse00230
Purine metabolism
sse01100
Metabolic pathways
sse01110
Biosynthesis of secondary metabolites
Module
sse_M00048
De novo purine biosynthesis, PRPP + glutamine => IMP
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
Ssed_0973
Enzymes [BR:
sse01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.21 phosphoribosylglycinamide formyltransferase 2
Ssed_0973
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Gene cluster
GFIT
Motif
Pfam:
ATP-grasp
PurT_C
RS_preATP-grasp-like
Dala_Dala_lig_C
ATP-grasp_3
Epimerase
PylC-like_N
2-Hacid_dh_C
CPSase_L_D2
TrkA_N
ThiF
ATPgrasp_ST
Motif
Other DBs
NCBI-ProteinID:
ABV35584
UniProt:
A8FRW1
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Position
complement(1156025..1157200)
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AA seq
391 aa
AA seq
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MIGTPHSNGALRAMLLGCGELGKEVAIELQRMGVEVIGVDRYPNAPAMQVAHRFHVINML
DGDALSNIIEQEQPHLVIPEIEAIATQTLVEMEAEGVNIVPTAKATKLTMDREGIRRLAA
ETLGLPTSPYFFCDTQTEFELAIENIGMPCVVKPVMSSSGKGQSVIKEAGQVLSAWNYAQ
EGGRAGGGRVIVEGFVSFDYEITLLTISAVNGIHFCDPIGHRQEDGDYRESWQPQAMSPQ
VLAKSQEIGRKVVEALGGYGLFGVELFIKGDEVYFSEVSPRPHDTGLVTLISQDLSEFAL
HARAILGLPVSNIAQHGPSASAVILAEGQSHNIRYQGMAAALQAPDTQLRLFAKPEIDGR
RRLGVALARGESIDKAIDKALVCAGKVEVIL
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgataggaacaccacattcaaatggcgcgcttcgcgccatgcttctcggctgcggcgaa
ctcggtaaagaggtcgcaatcgaactacaacgcatgggagtcgaagtgatcggtgtcgac
cggtaccctaacgctccggcgatgcaggtcgcccaccgatttcatgtcatcaatatgctc
gatggcgatgcactgagcaacattattgaacaggagcaacctcatctggttattcctgaa
attgaggccattgccactcaaaccttagttgagatggaagcggaaggtgtcaatatcgtg
cctaccgctaaagccactaagctgaccatggaccgagaagggatcagacggctggcggca
gaaaccttgggcctgccgacctcaccctactttttttgcgatacacaaaccgagtttgag
ctggccatcgaaaacattggcatgccctgcgttgtaaaacctgtgatgagctcatcgggt
aaaggacagagtgtcatcaaagaggccgggcaagtgctcagcgcctggaactatgctcaa
gagggaggccgtgcaggtggtggccgagtcattgtcgaaggctttgtctccttcgattac
gagatcaccctactcaccatcagcgccgttaatggcatccatttttgcgaccccataggt
cacaggcaggaagatggcgactatcgtgaatcatggcaacctcaggccatgtcgcctcag
gtattggctaagtcacaagagataggtcgtaaggtcgtcgaagctttggggggttatggc
ttattcggcgtcgaactgtttattaagggcgatgaagtctatttctctgaagtttctccc
cgtccacacgatacgggacttgtgaccttaatcagccaggacctatctgaatttgccctg
catgcacgcgccattcttggtttacccgtctccaatattgcccagcatggcccaagcgct
tcggcagtgattctggcagagggacaatctcacaatattcgctatcagggaatggctgcg
gcgctacaagcccctgacacccagttacgtctattcgcaaaacctgagatcgatggacgt
cgccgtctgggtgtcgccttagcccgcggggaaagcatcgataaggcgatagataaggcg
ctggtttgcgccggtaaggttgaagttattttatag
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