Shewanella sediminis: Ssed_0980
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Entry
Ssed_0980 CDS
T00596
Name
(GenBank) integral membrane sensor signal transduction histidine kinase
KO
K02484
two-component system, OmpR family, sensor kinase [EC:
2.7.13.3
]
Organism
sse
Shewanella sediminis
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sse01001
]
Ssed_0980
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sse02022
]
Ssed_0980
Enzymes [BR:
sse01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
Ssed_0980
Protein kinases [BR:
sse01001
]
Histidine kinases
OmpR family
Ssed_0980
Two-component system [BR:
sse02022
]
OmpR family
Unclassified
Ssed_0980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HisKA
HATPase_c_2
HATPase_c_5
HAMP
HATPase_c_3
DUF1090
Motif
Other DBs
NCBI-ProteinID:
ABV35591
UniProt:
A8FRW8
LinkDB
All DBs
Position
complement(1163003..1164295)
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AA seq
430 aa
AA seq
DB search
MKRLFISLYLLLSLSVLGIGWTLDSIWQNNVEESGALDAPLIALAQLLAKLPEEQRHFYL
QELKQNPDYPIKLIDASQIAISDQSTLTANSVLITEQDDDHELHFVKVNDQILVAGPIEI
DPRKRLRGLFTLFFYLSLAFIALIWVWPLSRDIKTLRNATKEFGQANWDTQITLSSRSQV
LPLAITFNEMAQQISTLIENQKHLSNAVSHEIRTPLARLKFALALMPQYCKPDSDVQRRT
DFLNDMQQDVKEMENLLQELLTYASLESQRKEVQLEHCDLSVLTKQTVDRLSSTISAPIE
FENSDTPVYLMGDPSLIERAIQNLITNAQRFGRQSIQVEIKQTRELVSLSVADDGQGIPL
EDQCKIFEPFYRSQSVQNGNKGHGLGLAIIKRIMERHNGKVTLESRDGYTCFTLIWPTPA
QAKNKSQVKK
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
ttgaaacgactttttatcagtctttacctgctactaagcctcagtgttttaggtataggt
tggacactcgatagcatttggcaaaataatgtcgaagagagtggtgcattagatgcacca
cttatcgctttggcgcagctgctggctaagctccccgaagagcagcgtcatttttatctt
caagagttaaaacaaaaccctgactaccccatcaagctgattgatgccagtcaaatagcg
atatcggaccaaagcacactcactgcaaacagtgtgcttatcaccgagcaagacgatgac
catgagctgcatttcgttaaagtaaacgatcagatcttagtcgccggccccatcgagata
gatccccgaaagagattacgcgggttattcaccctattcttctacctctctttagccttt
attgccttaatctgggtttggccactctcgagggatattaagactctgagaaacgcgact
aaggagtttggtcaggcaaattgggacacacagataaccttatcatcccgctctcaggtg
ctgcctctggctatcacctttaatgagatggcacagcagatcagtacccttatcgagaat
cagaaacacctttcgaacgccgtttcccatgagatccgtaccccacttgccagactgaag
tttgccttggccttaatgccgcaatattgcaagcccgactcagacgtgcagcgaagaaca
gattttttgaacgatatgcagcaggatgtgaaggagatggagaatctactccaggagctc
ttaacctacgctagcctcgagtcacaacgtaaagaggttcaactcgaacattgtgacctc
agcgtattaactaaacaaaccgtcgataggctatcgtcaaccatatcggccccgattgag
tttgaaaacagcgataccccagtctatctcatgggcgacccctctctcatcgaaagggcg
atacaaaatctgatcaccaatgcccaacgattcgggcgtcaatccattcaggttgagata
aagcagactcgagaactggtatcactatcggttgcagacgatggtcagggaataccgctt
gaagaccaatgcaagatatttgaacccttctatcgcagtcagtcagtacagaatggtaat
aaaggccacgggttaggcctggcaatcatcaagcggatcatggaacgtcacaacggtaag
gtgactctggaaagccgggatggatacacctgcttcacacttatctggcccacaccggcc
caggctaagaataagagtcaggtaaaaaaatga
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