Shewanella sediminis: Ssed_1016
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Entry
Ssed_1016 CDS
T00596
Name
(GenBank) permease YjgP/YjgQ family protein
KO
K11720
lipopolysaccharide export system permease protein
Organism
sse
Shewanella sediminis
Pathway
sse02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Ssed_1016
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sse02000
]
Ssed_1016
Transporters [BR:
sse02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
Ssed_1016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
DUF2518
Motif
Other DBs
NCBI-ProteinID:
ABV35627
UniProt:
A8FS04
LinkDB
All DBs
Position
1210366..1211424
Genome browser
AA seq
352 aa
AA seq
DB search
MRILDLYIARTIVSSSALCLLILTGLSGIIKWVDQLRLVGRGSYTMLDAGIYVLFLIPRD
LEMFFPLGVLLGALIGMGMLASNSELVVMQSSGLSRWQITLSAMKTAIPLMLLIMALGEW
GAPVAEQKANELQATKLSGGSLIKSSRGIWAKDGDLFVNIGEVEDINHLGNITLYEFDET
LSLVRTIHAEHGVYSNDHWRLMDVRQTDLTEDKVTLTDLTLYRWESTLTPDKLSVVSVKP
ESLSIQGLMGYLDYLKVNNQDSARYELALWRKLLQPVTVGVMMLVALSFVFGPLRTVTMG
ARVLLGVIAGFSFYISSEIFGPLTLVYGVPAFIGAGMPAVIFSAGAVYFIRK
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
gtgaggattttagatctctatattgccagaacaatagtcagttcctctgctctatgtttg
cttattcttaccgggctttcaggcatcattaaatgggtagatcagctacgtttagtcggg
cgtggtagttacaccatgctcgatgccggtatttatgtcttgttccttattcccagagac
ttggagatgtttttccctctgggtgtgctgctaggtgccctgattggcatggggatgctg
gcatccaactctgagttggttgtgatgcagtcttcgggcttgtctcgttggcagattacc
ctatcggcgatgaaaaccgccatacctctgatgctgttgattatggcgttaggtgaatgg
ggggccccggttgcggagcaaaaagccaatgaattacaggcgaccaaactctccggcggt
agcctgattaaatcaagtcgtgggatctgggccaaagatggcgatctgtttgtgaatatc
ggtgaagtcgaagatatcaatcatctgggtaatatcaccttgtatgagtttgatgagacg
ctctctttagtgcgtaccattcatgccgaacatggtgtctattctaatgaccattggcgc
ttaatggacgtgaggcagaccgatctgacagaagataaggtgacactcacggatttaacg
ctctaccgttgggagtcgaccctgactccggataaactgagtgtcgtttcggttaagcct
gaatcgctctcaattcaaggactgatgggctacctggattacctcaaggttaataatcag
gattctgcccgatacgaattggcactgtggcgcaagctactgcagccagtgaccgtggga
gtgatgatgttagtcgcgctctctttcgtgtttggtccgctaagaaccgtgaccatggga
gcgagagtgctgttaggggtcatcgccggattcagcttctatatcagcagtgaaatcttt
ggcccgctaaccttagtatacggcgtaccggcatttatcggcgccggaatgccggcagtg
atattcagtgctggagccgtctactttatcaggaagtaa
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