Shewanella sediminis: Ssed_1100
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Entry
Ssed_1100 CDS
T00596
Name
(GenBank) outer membrane receptor protein
KO
K02014
iron complex outermembrane recepter protein
Organism
sse
Shewanella sediminis
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sse02000
]
Ssed_1100
Transporters [BR:
sse02000
]
Other transporters
Pores ion channels [TC:
1
]
Ssed_1100
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
ABV35711
UniProt:
A8FS88
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All DBs
Position
complement(1305410..1308178)
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AA seq
922 aa
AA seq
DB search
MKPQMKLSALTLAITMAALAPSSLLAAEDSAATDGANSKIEKIEVTGSRIKRADFEGVAP
VTVITADDIANSGLSSISEVLQSSVANNGGSLNGDSDGFTDSASSVNLRGMGANRTLVLI
NGRRQASFPSAAGGTSNFVDTSDIPTAAVERIEILTGGASAIYGSDAVGGVVNIILKKQY
DGAKVEAKYSDTTQGGGEQFDLSYLQGINTENSQSLIMLEYKQVGAIQTYQRDDLYSPAY
YEDEDGDIRWGSGPYGDSFPSSWASWIRDYSKVYTDDKYSPVDEAQCTNLFGDKGVYVEA
GTYDCYYDKYADRGLQSEYDRINLVVNSTYDLNDDWQIYGMLNASYKESTKYKDEKGFGD
YFYQDEATGAMSYDKYEFEDYNKFQMRRRMEEYPGPRTYDTQNTKASLAFGANGTIGDYE
LDISWSSGYALYEKQNHHMVRADALLGMVTFDPNDTDASKWYPNNQLTTEQAEALIGDST
KKSDSSMHQLQAVFTGDLMELEAGTVGFATTAEWARESYEDTLDETTMNGGFIGMGGTGG
KGDRDRVAVAGELQVPLLADMTGVKSLDLSAALRYDQYLDDSDVGGATTPQVGLSYRPID
EVMVRANWGKSFRAPDMHRLYSGLTRSFGGTEYPHPTIPDEIYEDDYDGFNSGNLNLTEE
KGEFWNLGFVANVTDNADLTLDWWNIELEGAVKTISTDEMLEDPSYIKNGQYTDCATMPE
VGYLTEFDDDGIENIACMRKGPINSAYEASEGIDASFNYLFPETAAGEFKFKLAASYLLK
KEYQEREGDEIEEQTETDYFPKWKGNASLSWSYEDFTATIAYYYTGEAVGTDLFEYVDEN
GDDVESMETDTLDPYQIINITLSYYAPWEGKFTAGVKNLTDEMPPLYDIRNDEHNDWPYY
QDDNSSYSAKGRSLFLGYSQKF
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccacagatgaaattatcggcattaacattagccataaccatggcggcattggca
ccttcgtcgctactcgctgcagaagattctgccgcgacagacggcgcaaacagtaagatt
gagaaaattgaggtaacgggttcccgtattaaacgtgccgactttgaaggggttgctcca
gtcacggtgatcacagcagatgatattgccaatagtggcctatcttctatctctgaagtc
cttcaatcttcagtggcaaataacggtggttcacttaacggtgacagcgatggttttacc
gatagcgcaagctcagttaaccttcgcggtatgggcgccaacagaactctggtacttatt
aatggccgccgccaagcctcattcccttctgctgctggtggtacttcaaacttcgtcgat
acctctgatattccaacggctgcagttgaacgtatcgaaatccttaccggtggtgcatcg
gcgatttacggttcagatgctgtcggtggtgtagtaaacatcatcctcaagaagcaatat
gatggtgctaaggttgaagcgaaatactcagatactacccaaggtggtggtgagcagttt
gatctatcttacctgcagggtatcaacactgaaaacagtcaatctttgatcatgctcgaa
tacaagcaggttggcgcaatccagacctatcagcgtgacgatctatacagccctgcctat
tatgaagatgaggatggcgacattcgttggggttctggaccatacggtgactcatttcca
tcaagctgggcatcttggatcagagattactcaaaagtttataccgatgataagtacagc
cctgtcgatgaagctcagtgtactaatctgttcggtgacaagggggtctatgtagaagct
ggtacttatgattgttactacgataagtatgccgaccgcggtctacagtcagaatatgac
agaatcaacctggttgttaacagcacttacgatcttaacgatgattggcagatttatgga
atgcttaatgcctcctataaagagagcactaagtataaagatgagaaaggtttcggggat
tacttctatcaagatgaagccacaggtgcaatgagttacgacaagtacgaatttgaagat
tacaacaaattccagatgcgtcgtcgtatggaggagtaccctgggccacgtacctatgac
acccagaacactaaagcctctctggcttttggtgctaacggtaccattggtgattacgaa
ctggatatctcctggtctagcggctacgcactgtatgagaagcagaaccatcatatggtc
agagctgatgccctactcggtatggtgactttcgatcctaatgacacagatgcttctaag
tggtacccaaataaccagttaaccacagagcaagctgaagcacttattggtgactcaacg
aagaaatcggactctagcatgcaccagttacaggccgtatttaccggtgacttgatggag
ctggaagcgggtactgttggctttgcaactacagcagagtgggcacgtgaaagctatgaa
gataccttagatgaaaccaccatgaacggcggttttatcggtatgggtggtacgggtggt
aagggtgaccgtgaccgtgttgctgttgcaggtgaattgcaggtcccactacttgccgat
atgacaggtgttaagtcattagacctatctgctgcacttcgttatgaccaatacctggat
gattcagatgtgggcggagcaacgactcctcaggttggcctaagttaccgaccaattgat
gaggtaatggtacgtgctaactggggtaagagtttccgagcgccagatatgcatcgcctc
tattctggattaacaagaagttttggtggaacagagtatccacatccaacaataccagat
gagatctatgaagatgattacgatggcttcaactctggaaacctaaaccttaccgaggag
aagggtgaattctggaacctaggctttgttgccaatgttacggataatgcagatctaaca
ttagactggtggaacatcgaacttgagggtgcggttaagacaatttcaaccgatgagatg
ctagaagacccgagctatatcaagaatggtcaatatacagattgcgcaacaatgccagaa
gtgggttacctgactgagtttgatgatgacggcatcgaaaacatcgcctgtatgcgcaaa
ggtcctattaatagtgcctatgaagcatcggaaggtatcgatgccagcttcaactacctg
ttcccggaaactgctgccggtgagtttaagttcaagcttgcagcctcttacctactcaag
aaggagtatcaagagagagaaggtgatgagatagaggagcagactgagacggattatttc
cctaagtggaagggtaatgccagcctgagctggagctatgaagacttcacggcaaccatc
gcatactactacactggagaggccgtaggtaccgatctatttgaatacgttgatgaaaat
ggtgatgatgtagagtcgatggagactgataccttagatccatatcagatcatcaacatc
acgctatcttactacgcaccatgggaaggtaagttcaccgcaggtgttaaaaacctgacc
gatgagatgcctccactttacgatatacgtaacgacgagcacaacgactggccatactat
caagatgataacagcagttactctgccaaaggtcgtagcctgttcttgggttactcacag
aagttctaa
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