Shewanella sediminis: Ssed_1104
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Entry
Ssed_1104 CDS
T00596
Name
(GenBank) Tyrosine--tRNA ligase
KO
K01866
tyrosyl-tRNA synthetase [EC:
6.1.1.1
]
Organism
sse
Shewanella sediminis
Pathway
sse00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Ssed_1104
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sse01007
]
Ssed_1104
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sse03016
]
Ssed_1104
03029 Mitochondrial biogenesis [BR:
sse03029
]
Ssed_1104
Enzymes [BR:
sse01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.1 tyrosine---tRNA ligase
Ssed_1104
Amino acid related enzymes [BR:
sse01007
]
Aminoacyl-tRNA synthetase
Class I (A)
Ssed_1104
Transfer RNA biogenesis [BR:
sse03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Ssed_1104
Prokaryotic type
Ssed_1104
Mitochondrial biogenesis [BR:
sse03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
Ssed_1104
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
SYY_C-terminal
S4_2
S4
TyrRSs_C
Motif
Other DBs
NCBI-ProteinID:
ABV35715
UniProt:
A8FS92
LinkDB
All DBs
Position
1313930..1315126
Genome browser
AA seq
398 aa
AA seq
DB search
MADLDQALAEIKRGTDEILLEADLLEKLKEGRPLRIKLGADPTAPDIHLGHTVILNKMRT
FQELGHEVIFLIGDFTGMVGDPSGKNSTRPPLTREQVLANAETYKQQVYKILDPAKTRIE
FNSSWLEPLGAAGMIRLASKQTVARMMERDDFKKRYGSGQSIAIHEFMYPLLQGYDSVAL
KSDVELGGTDQKFNLLMGRELQKSEGQKPQTVIMMPLLEGLDGVKKMSKSAHNYIGVSEP
AGEMFGKIMSISDELMWRYFELLSFRPLGEIEQFKADVDAGANPRDIKIALAKEIIARFH
DEAAADAAHQEFINRFQKGAIPTDIQELEIAAGEGIAIANLLKEAGLVNSTSDAMRMIKQ
GAAKIDGTKIEDTRLQLSAGTTGVFQVGKRKFAKITLV
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggctgatttagaccaagcattagcagaaattaaacgtggtaccgatgagattttactc
gaagcggatctgctggaaaaattaaaagagggacgtcccttacgtatcaagcttggagcc
gatcctaccgcgcctgatattcatttaggtcataccgttatcttaaataagatgcgtacc
tttcaggagctgggtcatgaagttatcttcttgatcggtgactttaccggtatggtcggt
gacccaagcggtaagaacagtactcgtcctcctttgacgcgcgagcaagtgttggccaat
gctgaaacctataagcagcaggtttacaaaatcttagacccggctaagactcgtatcgag
tttaactccagctggcttgagcctctgggcgccgccggtatgatccgtttggcatcgaag
cagaccgttgctcgtatgatggagcgtgacgactttaagaagcgttatggctcgggtcag
tctatcgcgattcacgaattcatgtatccactgctacagggttatgactcggtggcactc
aagtcggatgttgagctcggcggtaccgatcagaagtttaacctgctgatgggccgtgag
ctgcaaaagtcggaaggtcagaagccacaaacggttatcatgatgccattgcttgaaggc
ctcgatggcgtgaagaagatgtctaagtctgcgcacaattatattggtgtgagtgagcct
gccggtgagatgtttggcaagataatgtccatctctgatgagttgatgtggcgctacttc
gagctattatcattccgtccactgggtgaaatagagcagttcaaggccgatgtagacgcc
ggtgctaacccacgtgacatcaagattgcgctagccaaggagatcattgcacgcttccat
gatgaagccgctgccgatgctgctcatcaggagtttatcaatcgcttccaaaaaggcgcc
atccctaccgatattcaagagttagagatcgcagccggtgaagggatagctatcgctaac
ctgcttaaagaagcgggtcttgtaaactcgacctcagatgcgatgcgcatgatcaagcaa
ggtgccgccaagattgatggcactaagattgaagatacacgtcttcagctaagcgccggg
actacgggtgtgttccaggtgggtaagcgcaagtttgctaagatcactctggtataa
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