Shewanella sediminis: Ssed_1121
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Entry
Ssed_1121 CDS
T00596
Name
(GenBank) transcriptional regulator, TetR family protein
KO
K02167
TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
Organism
sse
Shewanella sediminis
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sse03000
]
Ssed_1121
Transcription factors [BR:
sse03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
Ssed_1121
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_6
TetR_N
Motif
Other DBs
NCBI-ProteinID:
ABV35732
UniProt:
A8FSA9
LinkDB
All DBs
Position
complement(1335847..1336452)
Genome browser
AA seq
201 aa
AA seq
DB search
MPRPPMKAVRQQQLIDATLVSVERHGLHNTTINTISGLAGLSSGLISHYFGGKQGLIEAT
QKYLLDQLKQALLSRTVGKTMLPLERLHAIVDANFTELQRSRPATKTWLSFWSQAMHEQG
LARLQHINSQRLYSNLLFSFKKLLPQAQAITAAKQTAAMIDGFWLRSALSPAPEKEFEQA
QILCKAFIEAVIMQYGENRCR
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcccgccaatgaaagccgtcagacaacaacagctaatcgatgcaaccttggtc
tctgttgaacgtcatggtctacacaatacaacgatcaacaccatcagtggcttggcagga
ttatcatcagggctaatcagccattacttcggcggtaaacaaggcttaattgaagcgaca
caaaaatacctgctagaccaactcaaacaagcgttattgagtcgtacagtgggcaaaacc
atgctcccgcttgagagattacatgccattgttgatgccaactttaccgagctgcagcgc
tcaagaccggcaacaaaaacctggctgagcttctggtcacaagccatgcatgagcaagga
cttgccagattacagcatatcaatagtcaacgattgtatagcaaccttttgttctctttt
aaaaaattacttccccaagcccaagccatcaccgcagctaagcagactgctgcgatgatc
gatggcttttggctacgcagtgcattaagccctgcaccagaaaaagagttcgaacaggcc
caaattttatgtaaagccttcatcgaggcagtgatcatgcagtacggagaaaatcgatgt
cgttag
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integrated database retrieval system
