Shewanella sediminis: Ssed_1260
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Entry
Ssed_1260 CDS
T00596
Name
(GenBank) YbaK/prolyl-tRNA synthetase associated region
KO
K19055
Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
Organism
sse
Shewanella sediminis
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sse03016
]
Ssed_1260
Transfer RNA biogenesis [BR:
sse03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Trans-editing factors
Ssed_1260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_edit
PsaD
DUF6424
Motif
Other DBs
NCBI-ProteinID:
ABV35871
UniProt:
A8FSP8
LinkDB
All DBs
Position
complement(1496104..1496583)
Genome browser
AA seq
159 aa
AA seq
DB search
MTISTRLNDYLSDNEVNYNLVAHPHSFNSLSSAIAAHISPAQVAKAVILEDHEGRKMMAV
LPADHKINLGALSEKLNRDFHLIKEQAVYRMFNDCEHGAIPPIGDVYNMDAVYDDLLVES
NELYLEAGDHSSFIHMERKDFVRLIKDAKHLRFSHQTIH
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atgactatttcgacacgtttgaatgattatcttagcgataacgaggtcaactataacctc
gtggctcatccccatagctttaactctctgagttctgcgattgccgctcatatctctccg
gcacaagtggcgaaagccgtaattctggaagaccatgagggacgaaaaatgatggctgtc
ctcccagccgatcataagatcaacttaggggcactcagcgaaaaacttaatcgagatttc
cacctgataaaagagcaagccgtctatcggatgttcaatgactgtgaacatggcgcgata
ccacctatcggtgatgtctacaatatggacgccgtttacgatgatctactagtggagtct
aatgagctgtatttggaggcgggtgatcacagtagctttatccatatggagcggaaagat
ttcgttcgactgatcaaagatgccaaacatcttagattcagccatcaaaccatccattag
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