Shewanella sediminis: Ssed_1271
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Entry
Ssed_1271 CDS
T00596
Name
(GenBank) Glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sse
Shewanella sediminis
Pathway
sse00260
Glycine, serine and threonine metabolism
sse00460
Cyanoamino acid metabolism
sse00630
Glyoxylate and dicarboxylate metabolism
sse00670
One carbon pool by folate
sse00680
Methane metabolism
sse01100
Metabolic pathways
sse01110
Biosynthesis of secondary metabolites
sse01120
Microbial metabolism in diverse environments
sse01200
Carbon metabolism
sse01230
Biosynthesis of amino acids
sse01240
Biosynthesis of cofactors
sse04981
Folate transport and metabolism
Module
sse_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Ssed_1271
09102 Energy metabolism
00680 Methane metabolism
Ssed_1271
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Ssed_1271
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Ssed_1271
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Ssed_1271
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Ssed_1271
Enzymes [BR:
sse01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Ssed_1271
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
ABV35882
UniProt:
A8FSQ9
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All DBs
Position
1510701..1511957
Genome browser
AA seq
418 aa
AA seq
DB search
MLKKDMNIADFDPQLFQAIADETRRQEEHIELIASENYTSPRVLEAQGSQLTNKYAEGYP
GKRYYGGCEHVDIAEELAISRAKELFGATYANVQPHSGSQANSAVFMALLQGGDTVLGMS
LAHGGHLTHGSHVSFSGKLYNAVQYGIDEATGKIDYAEVERLAVEHKPKMIIAGFSAYSG
IIDWGKFREIADKVGAYLFVDMAHVAGLVAAGIYPNPLPHAHVVTTTTHKTLAGPRGGLI
LSACDDEAIYKKLNSAVFPGGQGGPLMHVIAAKAVAFKEALEPEFTAYQEQVVVNAKAMA
KTFIERGYDVVSGGTDNHLFLLDLISKDITGKDADAALGLANITVNKNSVPNDPRSPFVT
SGLRIGSPAITRRGFKEEQSVELTNWMCDVLDDITDQGTIERVKNQVLELCARFPVYG
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaaaagatatgaatatcgcggactttgatccacaactgtttcaagcgattgca
gatgaaactcgtcgtcaggaagagcacatcgaacttatcgcttcagaaaactacaccagt
ccacgtgttctggaagctcaaggttctcagctaaccaataaatacgccgaaggttatccg
ggtaagcgttattacggtggttgtgagcacgtagacattgcagaagaactcgcaatttct
cgcgccaaagagctatttggtgctacctatgccaacgtacagcctcactcaggttctcag
gctaactcagctgtatttatggcactgcttcaaggtggcgatacggtattgggtatgagc
ttagctcacggtggtcacttaactcatggttcacatgtgagtttttctggcaagctatat
aatgccgttcagtacgggatcgatgaggcgacaggcaagattgattacgccgaagttgag
cgtcttgccgttgagcacaagcctaagatgatcatcgcaggtttcagtgcttactcaggt
atcatcgactggggcaagttccgtgaaatcgccgacaaagtaggggcttacctgtttgtt
gatatggctcacgttgcaggcctggttgctgccggcatctacccgaatccactcccgcac
gctcacgttgtaacgacgacaactcacaagacgcttgccggtccccgtggtggtttgatc
ctatctgcttgcgatgatgaagctatttataaaaagctgaactcagccgttttccctggt
ggtcagggcggtcctttgatgcacgttatcgctgctaaagcggttgcgtttaaagaagca
ctcgagccggagtttactgcttatcaggagcaggtcgttgtgaacgcgaaggctatggct
aagacgtttatcgagcgtggctatgatgtcgtttctggtggtacagacaaccatctgttt
ttacttgatttgataagcaaagatatcacaggtaaagacgccgatgctgccttaggactt
gctaatatcacggttaataagaactcagttcccaatgatccgcgttctccgtttgtgact
tcgggtcttcgtatcggctctccggcaataactcgtcgtggcttcaaagaggagcagtcg
gttgagttgactaattggatgtgtgatgtacttgatgacatcacagatcaaggcacgatt
gagcgtgttaagaatcaggtgcttgaattgtgcgccaggttccctgtttacggttaa
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