Shewanella sediminis: Ssed_1285
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Entry
Ssed_1285 CDS
T00596
Name
(GenBank) Histidine kinase
KO
K07678
two-component system, NarL family, sensor histidine kinase BarA [EC:
2.7.13.3
]
Organism
sse
Shewanella sediminis
Pathway
sse02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Ssed_1285
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sse01001
]
Ssed_1285
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sse02022
]
Ssed_1285
Enzymes [BR:
sse01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
Ssed_1285
Protein kinases [BR:
sse01001
]
Histidine kinases
NarL family
Ssed_1285
Two-component system [BR:
sse02022
]
NarL family
BarA-UvrY (central carbon metabolism)
Ssed_1285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
sCache_4
Response_reg
HATPase_c
HisKA
Hpt
HAMP
HAMP_2
PDE8A_N
DUF4795
Motif
Other DBs
NCBI-ProteinID:
ABV35896
UniProt:
A8FSS3
LinkDB
All DBs
Position
complement(1523979..1526792)
Genome browser
AA seq
937 aa
AA seq
DB search
MNNAKNMTKYSLRSWVLVLALAPTILVGILLGSYFTINRFYELEETLIEQGGNIIEPLAI
AAEIGLEKKDFETTKKLITAAQLNKSSLVQFIAIFDTNNRVIVTSHHYKDHELMRYDQPL
SSLMRTELEQVGDSLILRSPIFSSEHELKVNSFDEQDAEQLIATKLGYIAVLINKENALL
EQHRAAVAAFIIVLIGVQLNLLFTFRLVKNVTQPITEMVRVVAKIREGKLDTRVDGNLIG
ELDLLKRGINAMAGSLSDYHDEMQQNIDQATSDLRETLEQIEIQNVELDLAKKRALEASR
IKSEFLANMSHELRTPLNGVIGFAKQLLKTPLHSSQQDYINTIEKSATTLLGIINDILDF
SKLEAGKMVLENMPFALREMLDDTITLLSNSAREKDIELVVDIESDVPEDLSGDAMRISQ
IMTNLVGNAIKFTDQGSVHLKLQLTESNNEQVHLRCEVTDTGIGIDDSQKEVLFQAFGQA
DSSISRRFGGTGLGLIITKRLVNRMGGQIGCISKLDKGSTFWFTLPLQTSQYPIGQILPL
DKLQGKSVLLLEPRELSNNTLNRLVNHWEMKVTNAHSFEQLGNVFNQKTSTFDYALISCK
GLKASGNISSQLKEIKAHCQYLVLLCSSNEAITHNLLPFVDKVLPAPIGEKALAKILIDP
QPDTDSASLLEDLGIPEPIERQPLRVLAVDDNPANLKLIDTLLKELVNQVTVIDSGQGAV
SIAQERSFDLIFMDIQMPGTDGISATKLIRQDSLNRNTPIIAVTAHAIAEERERIQQSGM
DGYLPKPIDEAALKSVISRWKTRPKFTHFDQFTLNWELCLTQASHKQDLALDMLKMLLDS
LPETTQQIESALEQFDDKQMLTTVHKLHGASCYCGIPTTQKLCQEIESTLKQGTSVTDVE
PEILELLDELTKVESAANQVISQLSTDIIDDNQTRLL
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgaataatgccaaaaacatgaccaaatacagtctccgttcctgggttctggtactggcg
ttagctccgacaattctggtcgggatattactgggcagttattttaccataaatcgtttc
tatgaactcgaagaaacactcatagagcaaggcggcaatattattgagcctttggcgata
gctgccgaaataggactcgaaaagaaagattttgaaaccacgaagaaactgatcaccgca
gctcaactgaataaatcgtcattagtacaatttattgccattttcgataccaacaaccga
gtcatcgtcacctctcaccactataaagatcacgaactcatgcgctatgatcagcccttg
agtagcttaatgcgaaccgaactcgagcaagtgggtgatagcctcattttacgtagcccg
attttctcatctgaacatgaactcaaagttaactcattcgatgagcaagatgcagaacag
cttattgcgactaagctgggttatatcgccgtactgattaataaagaaaatgcactgttg
gaacaacaccgagccgccgttgccgcatttatcatcgtattaatcggcgttcagcttaac
ctgctatttaccttcagactggtaaaaaatgtcacccagccgatcaccgagatggtgagg
gttgtcgcgaaaattcgtgaaggtaaactcgataccagagtggatggcaatctgatcgga
gaactggatctgcttaagcgtggtatcaatgccatggcaggttccctgtccgactaccac
gacgaaatgcagcaaaatatcgatcaggccacctcagatctacgagaaacgctcgagcaa
attgagatccaaaacgtcgaactcgacctggcgaaaaagcgagctctggaagccagcaga
atcaagtcagagtttctggctaacatgtcccatgaactcagaaccccactcaatggcgtt
atcggcttcgctaaacagctactaaaaacgccgttacactccagccagcaggactacatc
aataccatagaaaagagtgcaacgactcttctgggtatcatcaacgatattctcgacttc
tccaaactagaagcgggcaagatggtgctggaaaacatgccatttgcgctcagagaaatg
ctcgatgataccatcacgcttctgtcaaacagcgcacgcgaaaaagatatcgagcttgtt
gtcgatatcgagtctgacgtccccgaagacctatccggcgatgcaatgcgaataagccag
ataatgacgaacttggtcggaaatgccatcaagtttaccgatcaaggtagcgtgcacctc
aagctgcaattaaccgaatccaataatgaacaggttcatttacgatgtgaagtcaccgac
accggaattggtattgatgatagccagaaagaggtgctgtttcaggcgtttgggcaggca
gactcctctatctctcgtcgttttggtggaacgggtttgggattaatcattactaagcgt
ctggtcaatagaatgggcggacagatagggtgtatctctaagctcgataaaggctcaaca
ttttggttcactcttcctctgcagaccagtcaatatcctataggacaaatattgccctta
gataaattgcaaggcaagagcgtactcctgctagagccgagagagttatcgaataataca
ctcaataggctcgttaaccactgggaaatgaaagtgactaacgcccactctttcgagcaa
ttaggcaacgtcttcaatcaaaaaacgagtacttttgattacgcattaatcagctgtaaa
gggctaaaagcaagtgggaatatttcatctcaactgaaagagataaaagcacattgccaa
tatctggtcctactatgcagcagtaatgaagccataacccataatttattgccttttgtc
gataaggtgctccctgcgccaattggcgaaaaagcattagccaaaatcctcatcgatcct
caacccgatacagatagtgcctctttattggaagacttaggcataccggaacccattgaa
aggcaacctttacgggtactggccgtcgatgataaccctgcaaacttaaagcttatcgac
accctacttaaagagctagtcaatcaagttaccgtgattgatagtggccaaggggctgtg
agtatcgcccaggagcgtagcttcgacttaatatttatggatattcaaatgccgggtacc
gacggtattagtgccaccaagcttatccgtcaggattcattaaaccggaatacgcccatt
attgctgtcacagcccatgccatcgccgaggagcgtgagcgaattcaacaaagtggtatg
gatggttatttacctaaacctatcgatgaagcggccttaaaaagcgtgataagtcgctgg
aagaccagacctaagttcacccacttcgatcaattcacactcaattgggagctatgtcta
acccaagcaagccataagcaggatttagccctcgacatgctgaaaatgctattagattct
cttcctgaaacgactcaacagatagagagtgcgcttgagcagttcgatgataagcagatg
ctgactaccgtacataaattacatggcgctagttgttattgtggcattccaaccacacag
aagctatgccaggagattgagtcaacattaaagcaaggcacaagtgtaaccgatgtcgaa
cctgaaatacttgagttacttgacgagctaactaaggtagaatcggctgcaaatcaagta
atatcccagttatcaacggacataatcgatgacaatcaaaccaggcttctttaa
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