Shewanella sediminis: Ssed_1384
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Entry
Ssed_1384 CDS
T00596
Name
(GenBank) conserved hypothetical protein
KO
K09953
lipid A 3-O-deacylase [EC:3.1.1.-]
Organism
sse
Shewanella sediminis
Pathway
sse00540
Lipopolysaccharide biosynthesis
sse01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Ssed_1384
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sse01005
]
Ssed_1384
Lipopolysaccharide biosynthesis proteins [BR:
sse01005
]
Lipid A
Ssed_1384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxR
Dynein_C
RNase_Zc3h12a
Motif
Other DBs
NCBI-ProteinID:
ABV35995
UniProt:
A8FT22
LinkDB
All DBs
Position
complement(1647155..1648153)
Genome browser
AA seq
332 aa
AA seq
DB search
MNYQVSKRFISTSILLLISPWVSAGQWHLQVDNDFIFKDDGNYTNGLTLGWESAPLQNLD
DTASPIRWQSLFSFKQNSAQRAWGVKLTQQMWTPGEIKIETPQPYDRPYAGYLAIESHTA
TYGETWAQKNWLSLGISGPASGTEQLQKLFHKLTPSSTPNGWQHQIENQLTIQLAYELDA
LIMRRDAFSNAFTGETLWELSGFSHSQAGNFRSEADLGLTFRWGTNLADSFARLSQHSGQ
FGNISATTKFSSWMLFTRAYVGYRFNDLTIDGSLPYNSHVEFENSQAGVTTGIIWAHPSW
SLAWSFNAYTKEYQSDPDSWHGYGSLIISWQL
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgaactatcaggtttcaaagcgctttatcagtacctctattctcttgctcatctctccc
tgggtaagtgcaggacaatggcatcttcaggtagataatgacttcatcttcaaagatgac
ggtaactataccaacggcttaacgcttggttgggagagtgctccgctacaaaatctggat
gacacagcctcccctatacgctggcaaagtttgtttagcttcaagcagaacagtgcacaa
cgagcctggggagtgaaactcacacagcagatgtggacacccggtgaaatcaagattgag
actccccaaccctacgaccgcccctatgccggctacttagcgattgaaagtcacaccgcg
acctatggagaaacttgggcccagaaaaactggttatcattgggtatttcagggccggct
tccggtactgagcagttacagaaactgttccataagctcacgccatcatcgacaccgaat
ggctggcaacatcagattgaaaatcaattaacgattcaacttgcctatgaactagatgcg
cttattatgcgcagagatgcattcagtaacgcatttacaggtgaaacactgtgggagctg
agcggctttagtcattcacaagcggggaactttcgcagtgaagcggatctcgggttaacc
ttcaggtgggggacaaatttagcagactcatttgctcgcttaagccagcatagtggtcaa
ttcggtaacatctcggccaccactaaattcagcagctggatgctcttcacccgggcctat
gtgggatatcgattcaatgatctgaccatagatggatcccttccctacaactcccatgtt
gagtttgaaaacagtcaggcgggtgtcaccacaggcattatctgggcccatccaagctgg
tctctcgcgtggagctttaatgcttacaccaaagagtaccagagcgatcccgacagttgg
catggttatggctcattaatcatcagctggcagttgtaa
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