Shewanella sediminis: Ssed_1415
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Entry
Ssed_1415 CDS
T00596
Name
(GenBank) isocitrate lyase
KO
K01637
isocitrate/methylisocitrate lyase [EC:
4.1.3.1
4.1.3.30
]
Organism
sse
Shewanella sediminis
Pathway
sse00630
Glyoxylate and dicarboxylate metabolism
sse00640
Propanoate metabolism
sse01100
Metabolic pathways
sse01110
Biosynthesis of secondary metabolites
sse01120
Microbial metabolism in diverse environments
sse01200
Carbon metabolism
Module
sse_M00012
Glyoxylate cycle
sse_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Ssed_1415
00640 Propanoate metabolism
Ssed_1415
Enzymes [BR:
sse01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.1 isocitrate lyase
Ssed_1415
4.1.3.30 methylisocitrate lyase
Ssed_1415
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Gene cluster
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Motif
Pfam:
ICL
PEP_mutase
Androglobin_IV
Motif
Other DBs
NCBI-ProteinID:
ABV36026
UniProt:
A8FT53
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Position
1678176..1679501
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AA seq
441 aa
AA seq
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MNKASIPVSRQEQIQAIEKDWSENSRWKGVTRPYTAEDVVALRGSMVPENTLAKRGAARL
WELVNGGAKKGYVNSLGTLSGGQAVQQAKAGIEAIYLSGWQVAADANLAGAMYPDQSLYP
SNSVPAVLNNINSAFRRADQIQWSNGLNPGDEGYRDYFLPIVADAEAGFGGVLNSFELMK
SMIDAGAAGVHFEDQLASVKKCGHMGGKVLVPTKEAIQKLVSARLAADVCGVETLVIART
DANGADLLTSDCDPYDSDFITGDKCEEGFYRVKAGIEQAISRGLAYAPFADLIWCETETP
CLDEARKFADAIHEHFPDQLLAYNCSPSFNWKKNLDDETISHFQRELSQMGYKYQFITLA
GIHSMWYNMFDLAYDCARGEGVKHYVEKVQEAEFAAARKGYTFVAHQQEVGTGYFDRVTN
VIQGGHSSVTALTGSTEEKQF
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaataaggcatcgatacctgtttcacggcaggagcagattcaagccattgagaaggat
tggagtgagaactctcgttggaaaggggtcacccgtccctatacggccgaggatgtggtg
gccctgcgaggctcaatggtcccggagaatacgttggcgaaacgtggcgccgccagatta
tgggaactggttaacggaggcgctaagaaaggctacgttaattcactcggcaccttaagc
ggtggtcaggcggttcagcaggcgaaggcggggatagaggcgatatacctgtcgggttgg
caggttgcggccgatgcgaatttggccggggctatgtaccccgatcagtcactctatccg
tctaactcggtaccggcggtgctaaataatatcaatagtgcgtttcgccgtgcagatcag
atccagtggagcaatggactcaaccctggggatgaaggttacagagactatttcttaccc
atagttgccgatgctgaagctggcttcggtggagtactcaattcgttcgagttgatgaag
agtatgatcgatgccggtgctgccggggtacattttgaagaccaactcgcatcggtgaaa
aaatgtggccacatggggggcaaggtgctcgttccgacgaaagaggcgatccaaaaactg
gtgagtgcgaggctggcagcggatgtgtgtggggtggagaccttagtcatagcccgcacc
gatgccaacggagccgatctgctgacctcagattgtgatccctatgacagtgatttcatc
acgggagataaatgtgaggaggggttctaccgtgtaaaagccggaattgagcaggccata
tcccgtggtttggcttacgccccttttgccgatcttatctggtgtgaaacagagacgccc
tgtctcgatgaggccagaaagtttgccgatgccattcacgagcactttccggatcaactg
ttggcttacaactgctccccctcatttaactggaagaaaaatttggatgacgagaccatc
tcgcattttcagagagagctgtcgcagatggggtataagtatcaatttatcaccttagcg
ggcattcacagcatgtggtacaacatgttcgatctggcctatgactgtgctcggggagag
ggggttaaacactatgtcgaaaaggtgcaggaggcggaatttgcggcggcaaggaaaggc
tataccttcgtggcacaccagcaagaggtgggcacaggctacttcgaccgggtaacgaat
gtgatccagggcggtcactcctcggtgacggcattaaccggctcgaccgaagagaaacag
ttttaa
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