Shewanella sediminis: Ssed_1435
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Entry
Ssed_1435 CDS
T00596
Name
(GenBank) pyrrolo-quinoline quinone
KO
K17713
outer membrane protein assembly factor BamB
Organism
sse
Shewanella sediminis
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sse02000
]
Ssed_1435
Transporters [BR:
sse02000
]
Other transporters
Pores ion channels [TC:
1
]
Ssed_1435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PQQ_2
Beta-prop_ACSF4
PQQ
Beta-prop_EMC1_N
Beta-prop_BBS7
Beta-prop_LRRK2
DUF6906
flgE_D3
Motif
Other DBs
NCBI-ProteinID:
ABV36046
UniProt:
A8FT73
LinkDB
All DBs
Position
1699902..1701089
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AA seq
395 aa
AA seq
DB search
MKSWCKTLLACGLSLGLLSACSSSDVEEEPISPLPEIEASVFPEVSWSASVGNGVGDYYS
RLRPAVRYDKLYVADRYGEVTAFDEKTGEKVWSQDFSSVFKDNILAKNKGAKLASGVTAA
RNKVFIGGESGILGALDAETGETLWSVIAGGELLSAPSVGEDLVVVNTSSGTLEAFNVDD
GEKQWAYESKLPNLTLRGTGSASYESGGFFVGTADGKIAVVIKNNGQAAWEQAIYTPKGG
NEFTRMADIDMKPLIIGENLYAVSFNGNLVSMEVRTGRVVWTRKYSSFHELADSGVSLFL
VDDHSRIYSVDRRSGLESWSNTELTNRNLTSAAVFKDYIVVGDFEGYLHFINKSTGALVG
RIQIDGSGLFSQPLVEGDNIYVQTRDGKVARITLP
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcttggtgcaaaacattgctcgcatgtggattgagcttggggctgttatcggcc
tgttcgtccagtgatgtagaagaagagccgattagtcctttgcctgagattgaggcaagt
gtctttcctgaggtgagttggagtgcctctgtaggtaatggtgtgggggattattactcg
cgtcttcgacctgccgtgcgttacgacaagttatatgtcgccgatagatatggtgaagtc
accgcattcgatgagaaaaccggtgaaaaagtttggagccaggatttcagttcagtattt
aaggacaacattcttgctaagaacaagggggctaaattagcctccggcgttacggcagcc
cgtaataaggtgtttatcggtggagagagtggcatattaggtgcgctcgatgctgaaacg
ggtgagactctctggtcagttatcgcaggtggtgagctattgtcggcgccatccgtcggt
gaagaccttgtggtcgtcaacaccagctcgggaacactcgaagcctttaatgtcgatgat
ggtgagaaacagtgggcttacgagtctaagctaccgaatttaaccttgcgcggtaccggt
tcagcgagttatgagtctggcggtttctttgttggcacggcagacggcaagatcgcggtt
gtcatcaaaaacaatggtcaggcggcttgggaacaagcgatatatacgcctaaggggggt
aatgagtttacccgtatggccgatatcgatatgaagccattgatcataggtgaaaacctc
tatgccgttagtttcaacggtaacttggtctctatggaagtgagaaccggacgcgttgta
tggactcgtaaatactcgagcttccatgaacttgcagactctggcgtgagcttattcctc
gtcgatgaccatagccgtatatactcagtcgatagacgtagtggtttagaaagctggagc
aataccgagttaactaaccgcaacttaacatcggctgcggtatttaaagattatattgtt
gtcggagacttcgaaggttacctacactttatcaataagagtaccggcgccttggtgggt
cgcattcagatcgatggttcaggtttatttagccagccactggtcgaaggtgataacatc
tatgttcagactcgagatggtaaagttgccagaataacgcttccgtaa
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