Shewanella sediminis: Ssed_1538
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Entry
Ssed_1538 CDS
T00596
Name
(GenBank) Cysteine--tRNA ligase
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
sse
Shewanella sediminis
Pathway
sse00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Ssed_1538
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sse01007
]
Ssed_1538
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sse03016
]
Ssed_1538
Enzymes [BR:
sse01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
Ssed_1538
Amino acid related enzymes [BR:
sse01007
]
Aminoacyl-tRNA synthetase
Class I (G)
Ssed_1538
Transfer RNA biogenesis [BR:
sse03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Ssed_1538
Prokaryotic type
Ssed_1538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
DALR_2
tRNA-synt_1g
CysS_C
tRNA-synt_1
tRNA-synt_1f
GHMP_kinases_C
Motif
Other DBs
NCBI-ProteinID:
ABV36149
UniProt:
A8FTH6
LinkDB
All DBs
Position
1835163..1836542
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AA seq
459 aa
AA seq
DB search
MLKLYNSLTRQKEEFKPLQPGKVGMYVCGITIYDLCHIGHGRTFVSFDMIVRYLRYSGYD
VNFLRNITDVDDKIIKRANENKESCESLTERLIGEMHRDFDALNMKRPDFEPRATLHIPE
IIDMVEKLIEKEHAYVSGNGDVLFSVSSFPEYGRLSGQNLDQLQAGARVEVEDTKRDPMD
FVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGQHFDIHGGGSDLQFPHHENEIA
QSCCAHNTPYVNYWMHTGMVMVDKEKMSKSLNNFFTIRDVLEHYDAATVRYFLLSGHYRS
QLNYSEDNLKQAKSALERLYTSLKGLDLSVEAASADEYVAKFKVAMDDDFNTPEAYSVLF
EMVREINRLKEADNAKASSLGVKLKELADVLGILDQDVDTFFKGEGSTDEVAEIEALIAE
RNRARAEKDWPAADVARDGLNALGVILEDGPEGTTWRKK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagctatacaacagtctgacccgccaaaaagaggaattcaaaccattacagcca
ggaaaagttggcatgtatgtgtgtgggataaccatctatgacctttgtcatatcggtcac
ggtcgtacttttgtctctttcgacatgatagtgagatacctgcgttactccggatatgat
gtgaactttctacgcaacattaccgatgttgacgacaagatcattaagcgtgctaatgaa
aataaagagagctgtgagtcattgaccgaacggttaattggcgagatgcatcgtgatttt
gatgcgcttaatatgaagcgtcccgactttgaaccaagagcgacgctacatatacctgag
attatcgatatggttgaaaaacttatcgagaaagaacatgcctatgtgtcaggtaatggt
gatgtactgttcagtgtctcctcttttcctgaatatggacgtctgtccggacaaaaccta
gaccagttacaagccggtgcccgagtcgaagtggaagacactaaacgtgatccaatggat
ttcgtgctgtggaagatgtccaagcctggcgagcctacatgggagtcaccttggggaccg
ggccgccctggctggcacattgaatgttcagcaatgaactctaagcacttgggtcaacat
ttcgatatccatggtggcggctcagatcttcaatttcctcaccatgagaatgaaattgct
cagtcttgctgtgctcacaacacgccgtacgtaaattactggatgcataccggtatggtg
atggtcgataaagagaagatgtctaagtcgttaaacaacttcttcaccatcagagatgtt
ttagagcactatgatgcggcaaccgtgaggtatttcctgttgtctggtcattaccgcagc
caactgaactactcagaagacaatcttaagcaggcaaagtcggcgcttgagcgtctctat
acatcactcaaaggtttagacctgtcggttgaagctgcatctgccgatgagtatgtcgct
aagtttaaggtcgcaatggatgatgacttcaatacgccggaagcttactcggtgctattt
gagatggttcgagagataaaccgtctaaaagaagctgataatgctaaagcatcttcactc
ggtgtaaaacttaaagagcttgccgatgtattaggtatattggaccaggatgtcgacact
ttctttaagggtgaaggcagtacagatgaagtggcggagatcgaagccctgattgccgag
cgtaacagagcgagagccgagaaggattggcccgctgccgatgttgcccgtgatggcttg
aacgcactcggtgttatcttagaagatggcccggaaggtacaacctggcgtaagaagtaa
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