Shewanella sediminis: Ssed_1618
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Entry
Ssed_1618 CDS
T00596
Name
(GenBank) membrane protein involved in aromatic hydrocarbon degradation
KO
K06076
long-chain fatty acid transport protein
Organism
sse
Shewanella sediminis
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sse02000
]
Ssed_1618
Transporters [BR:
sse02000
]
Other transporters
Pores ion channels [TC:
1
]
Ssed_1618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Toluene_X
DUF2490
Porin_4
OmpA_membrane
OMP_b-brl
MtrB_PioB
TonB_dep_Rec_b-barrel
Motif
Other DBs
NCBI-ProteinID:
ABV36229
UniProt:
A8FTQ6
LinkDB
All DBs
Position
complement(1930627..1931949)
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AA seq
440 aa
AA seq
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MKYFNKTILAVAVTLASSQAMAAGFQLNSQSATGLGRAFAGDAVIADNASVLSRNPAAMA
LFDEKSLSVGVAYADLDVNVSDVSIPLGNYGNADDVAENKLIPNFYYIQPINDKWAFGVA
GFSNFGTGTDLTGLANSNPKAADGSIVPAPAPVDLLGNTEIITMNFNASLSYRFNDHFSV
GAGVDIIYGEGNLSREGNLPFGENGSMVPVSLVDVEADGVAFGGIIGAVYEFNADHRLGM
SYRFSPEFKATGDVNMTQPGVGAIAFDEINIPMPDIFQVAGFHQLTEKFALHYTAQLTTW
GDFHEITVTDGQLANGTPVGDAVLKQYAWDDSWLFSVGGTYTINEKWKVRAGYMHDQGVV
GDLSSLSIPDSDRNWYTAGVSYGLSTQSTIDMGIAFVRGEDVHVTEHSSVIEAIPGLSGD
VTAYTRSDAVYYSVQYSYQF
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgaagtacttcaacaagacaattttagccgttgctgtgacacttgctagttcacaagct
atggcagcaggattccaacttaacagtcaatcagcaactggactcggccgcgcatttgcc
ggtgatgcagttatcgctgataacgcatctgtgctatcacgtaacccagcagcaatggct
ctgtttgatgaaaaatcattgtcagttggtgttgcatatgccgatttagacgtgaacgtc
tctgacgtatcgattccattggggaattacggtaacgcagatgacgtagctgaaaacaaa
cttattcctaacttttactatatccaacctattaacgacaaatgggcatttggtgtcgca
gggtttagtaattttggtacaggtacagatttaaccggcctcgccaacagcaatccaaaa
gcagctgatggttcaatcgtgcctgcacctgccccggttgatctgttaggtaatacagaa
attattaccatgaatttcaatgctagcttatcttaccgtttcaatgatcatttcagtgtt
ggggctggagtagacatcatttacggtgaaggtaacttaagccgtgaaggaaaccttccg
ttcggtgaaaatggaagcatggtgccggtttctttagttgatgtagaagctgatggtgtt
gcatttggtggcattattggtgctgtttacgaatttaatgccgaccatcgtttaggcatg
agctaccgctttagcccagagtttaaagctactggcgatgtcaacatgactcaaccaggt
gtaggtgctatagcatttgatgaaattaacatcccaatgccagatatatttcaagttgcc
ggttttcaccagctcactgaaaaatttgccttacattacaccgctcagctaacgacatgg
ggcgacttccatgaaattactgttactgacggtcaactggcaaatggaacacctgttggc
gatgcagtacttaagcaatatgcatgggatgactcttggctattcagtgtcggtggtaca
tacactatcaatgaaaagtggaaagtgcgtgcaggttacatgcatgatcagggcgttgtg
ggcgatctcagttcactgtctattcctgactcagaccgcaactggtacacagctggtgta
agttatggccttagcacacaatcgactatcgatatgggcatcgcctttgtccgtggtgaa
gatgttcatgttaccgagcatagctctgtgatagaagctatcccaggtttgtctggcgat
gtaactgcatatactcgttcagatgccgtgtactattcagtacaatatagctatcagttc
taa
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