Shewanella sediminis: Ssed_1629
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Entry
Ssed_1629 CDS
T00596
Name
(GenBank) fatty acid oxidation complex, alpha subunit FadJ
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
sse
Shewanella sediminis
Pathway
sse00071
Fatty acid degradation
sse00280
Valine, leucine and isoleucine degradation
sse00310
Lysine degradation
sse00362
Benzoate degradation
sse00380
Tryptophan metabolism
sse00410
beta-Alanine metabolism
sse00640
Propanoate metabolism
sse00650
Butanoate metabolism
sse00907
Pinene, camphor and geraniol degradation
sse00930
Caprolactam degradation
sse01100
Metabolic pathways
sse01110
Biosynthesis of secondary metabolites
sse01120
Microbial metabolism in diverse environments
sse01200
Carbon metabolism
sse01212
Fatty acid metabolism
Module
sse_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
Ssed_1629
00650 Butanoate metabolism
Ssed_1629
09103 Lipid metabolism
00071 Fatty acid degradation
Ssed_1629
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Ssed_1629
00310 Lysine degradation
Ssed_1629
00380 Tryptophan metabolism
Ssed_1629
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Ssed_1629
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Ssed_1629
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Ssed_1629
00930 Caprolactam degradation
Ssed_1629
Enzymes [BR:
sse01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
Ssed_1629
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
Ssed_1629
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
Ssed_1629
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SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
ABV36240
UniProt:
A8FTR7
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All DBs
Position
1944090..1946237
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AA seq
715 aa
AA seq
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MEKTFNLARREDGIAILTMDVPGETMNTLRAEFGPEINQVLAEIKADSSIKGLVLISGKK
DSFVAGADISMLDACKTAADAKQLSQQGHVVFNELESLKIPVIAAINGACLGGGLELALA
CHQRVCSLNSKTMMGVPEVQLGLLPGGGGTQRLPRLVGITTALDMMLTGKQLRPKQALKM
GLVDDVVPESILLETAVEMALKGKRAPKKVKKSLVTRLLEGTPPGRNIIFDQAGKQVEKK
THGNYPAPAKIIDCVRQGMAKGLTKGLEVEANHFADLVVSKESEALRSIFFGTTEMKKET
GAGDVEPRKVHKAMVLGGGLMGGGIASVTTTKAKIPARVKDISEQGLSNALSYAYKLLDK
GVKRRHMTPAVRDNLMSLMTTTTEYKGIKDADIVVEAVFEDLKLKHQMVKDVERECGENT
IFASNTSSLPISQIAEAASRPENVIGLHYFSPVEKMPLVEVIAHEKTSAETIATTVAFAR
KQGKTPIVVQDGAGFYVNRILALYMNEAAQLLLEGQSVEHLDKALVKFGFPVGPMTLLDE
VGIDVGAKISPILESELGERFKAPAAFDKLLADDRKGRKNGKGFYLYGSKAKQRFKKKAK
LVDESVYAVLGLTPTSTDSNNDSQDVAQRCVVQMLNEAVRCLEEGIIASPRDGDIGAIFG
IGFPPFLGGPFHYIDSMGAAELVAVLETYQAKFGDRFTPCDRLKEMAENGLSFFE
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagacctttaatttagcgcgtcgtgaagatggtattgccatactgacaatggat
gtgcccggcgaaacaatgaacaccttgcgtgccgagtttggccctgaaattaaccaagta
ttagcagagataaaagccgacagcagtatcaaagggctggtacttatctccggaaagaaa
gactctttcgttgccggcgccgatatctctatgctggatgcctgtaaaacggccgccgat
gctaagcagttatctcagcagggacacgttgtctttaatgagctggaatcgttaaaaatt
ccggtcattgccgctattaatggcgcgtgtctaggtggtggactcgaattggcattagcc
tgtcatcaacgagtatgtagcttaaacagtaagaccatgatgggcgtgcctgaggtacaa
ctcggcctgttacccggtggtggaggaacgcagagattaccacgattagtcgggatcacc
accgctctggatatgatgttgacgggtaagcaacttcgtcccaagcaagcgcttaaaatg
ggattagttgacgatgtggttcccgagtctattttgcttgagaccgcggtagagatggca
cttaaggggaagcgtgcccctaaaaaagtgaaaaagtcattagtgacccgcctgcttgag
ggaactccgcccggccgcaacattatcttcgaccaagccggtaagcaagttgagaagaaa
actcacggtaactatccggccccggcaaaaattattgattgtgtacgtcaaggcatggcc
aaagggctaaccaaagggttggaggttgaggctaaccactttgccgatctggtcgtctct
aaagaatctgaagcgctgcgaagcatcttctttggtaccactgagatgaagaaagagact
ggcgccggtgatgttgaaccacggaaagttcataaggctatggtgttaggtggcgggctt
atgggaggaggtatcgcgtctgtgacgacgaccaaagctaaaatacccgctcgagtaaag
gatattagtgagcaggggctgagtaacgcgctttcttatgcttataagctattagataag
ggcgttaagcgtcgtcatatgacaccggcagtaagagataacttaatgtctctgatgacg
acaacgacagaatataaaggcattaaagatgccgatatcgtcgttgaagccgtgtttgaa
gatctgaaattaaagcatcagatggttaaagatgttgaacgtgaatgtggtgagaatacc
atttttgcctctaacacctcctcactgcctatttcgcagatagccgaggccgccagccgt
cctgaaaatgttattggcttacactacttttctccggtcgagaagatgcctttggttgag
gttatcgcccatgagaagacctctgccgaaacgatagccacaaccgtcgccttcgcccgt
aagcaggggaagacgcctatcgtggttcaagatggggctggtttctatgtcaaccgtatc
ttggccctgtatatgaatgaagccgctcaactgctgctggaagggcagagtgttgaacac
ttagataaggcgctggttaaatttggtttccctgtcggacctatgacgctactcgacgaa
gttggaatcgatgtcggggctaaaatttctcctatcttagagtcagagcttggcgaacgc
tttaaggctcctgcagccttcgataagctgcttgcagacgatcgaaaaggtcgtaagaat
ggtaaaggtttttatctttatggcagcaaggctaaacagagatttaagaagaaagcgaag
ctggtcgatgagtcagtctatgcagtgcttggtttaacgcctacatcaacggatagtaat
aacgactctcaggatgttgctcagcgttgtgtcgtgcagatgcttaatgaagccgttcgt
tgtctggaagaggggattatcgcctcaccacgtgatggtgatattggtgccatcttcgga
atcggtttcccgccgtttcttggaggcccgttccattatatcgattcaatgggagccgct
gagctggtggcagtattggaaacttatcaggccaaatttggagataggtttacaccttgc
gatcgtttaaaagagatggctgaaaatggactgtccttttttgaataa
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