Shewanella sediminis: Ssed_1675
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Entry
Ssed_1675 CDS
T00596
Name
(GenBank) oligopeptide-binding protein OppA
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
sse
Shewanella sediminis
Pathway
sse02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Ssed_1675
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sse02000
]
Ssed_1675
Transporters [BR:
sse02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Ssed_1675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Gp18_domIII_N
Motif
Other DBs
NCBI-ProteinID:
ABV36286
UniProt:
A8FTW3
LinkDB
All DBs
Position
2008622..2010160
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AA seq
512 aa
AA seq
DB search
MRTLFVIIGLFCISVFVNSANAQPNTLTIALGAEPDSGFDPVYGWGKYNNPLFQSSLIKR
DDKLKLTPDLALSWVLSKDKLTWDLNLRDGVLFSDGTQLTAEDIKFTFDTAKAAASVHDL
TNLSKVIITSNNSLSFKLKKPDINFIDNFINLAIVPAHSYNSGYGQMPTGSGPFKLVRWD
KGQQLIVKVNPYYYGQKPFFEKLIIVFSDEESRYSRLVTGQLDLAAIAPRYAQALPAGFK
LWSIESVDNRGISWPMPGVQSDDIGNDVTSQLVIRQAIDRVIDRDVLVNQLLDGHATAAY
SIADGLPWGPVETPLQVSSDKQLSEALALLDKSGWKLVDGTRQKQGLRASMTLYYLAGDS
IREQLALTVAQMVKPLGIEIHPRGESWENIYKHMHNQPVLFGFGSHSASEVRFVHHSQYR
GRDYYNAGYYINAELDAVLDSAQHAASWEESLPYWRHAQALIRQDLPWTWLVNLRHLYAA
NRCLDLAEPGVEPHGHGWPLANNISKWRWTCQ
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
gtgagaacattatttgttattatcggtctgttttgtatttcagtttttgttaattcagca
aatgctcagcctaatacattaaccatagctttaggtgccgaaccagatagtggcttcgat
cctgtttatggttggggtaagtataataaccctctatttcagtcatcgttaataaaacga
gatgataaattaaaattaactccggacttggctttatcctgggttttatctaaagacaaa
ctcacttgggatttaaatctaagagatggagtgttatttagtgatggaactcagttaacg
gctgaagatattaagtttacattcgacactgctaaagctgctgcaagtgttcatgactta
actaacttgtcaaaagtaattattacctccaataattcattgtcatttaaattaaaaaag
ccagatataaactttatcgacaactttattaacctcgcgatcgttcccgcacactcttat
aattcaggttatggtcaaatgcctaccggcagtgggccatttaagctggtacgttgggat
aaggggcaacagttaattgttaaagttaatccatattactacggccagaaaccatttttt
gaaaaactgatcatagtgttcagcgatgaggagagccgctattcgcgcttagttaccggc
caactggacttggcggccatagcgccgcgctacgcacaggctttacctgccggttttaaa
ctctggagtatcgagtcggttgacaatcgtgggatctcctggcccatgccgggtgtacaa
agtgacgatatcggcaatgatgtcacatctcaattagtgatacgtcaggcgatagatagg
gtgatagatcgtgatgtactcgtgaaccagttactcgatggccacgccacggcggcatat
tctattgccgacggcttgccctggggcccggttgagactcccctacaggtgtcttccgac
aagcagttgtctgaagcgttagcgctgctggataaatcgggttggaagcttgtcgatggc
acacgtcaaaaacagggtcttagggcgagcatgacactctactaccttgccggcgacagt
atccgtgagcagctggccttaactgttgcgcagatggtgaagcctttaggtattgagata
catccgaggggggaaagctgggagaatatctataagcatatgcataaccaacctgtgttg
tttggcttcggtagccattcggccagtgaagtgaggtttgtgcatcacagccaatatcgg
ggccgggactattacaatgcaggttattacattaatgctgagttagatgctgtgctcgac
agtgcgcagcatgcggcttcatgggaggagtcactgccatactggaggcacgctcaggca
ttgatacgtcaggatcttccctggacctggctggttaatcttaggcatctctacgcagca
aatcgctgcctcgatctcgccgagccgggagtcgaaccccatgggcatggttggccttta
gccaataacatcagcaagtggcgctggacatgccagtaa
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