Shewanella sediminis: Ssed_2221
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Entry
Ssed_2221 CDS
T00596
Name
(GenBank) PP-loop domain protein
KO
K14058
tRNA 2-thiocytidine biosynthesis protein TtcA
Organism
sse
Shewanella sediminis
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sse03016
]
Ssed_2221
Transfer RNA biogenesis [BR:
sse03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
Ssed_2221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP_bind_3
Motif
Other DBs
NCBI-ProteinID:
ABV36830
UniProt:
A8FVF7
LinkDB
All DBs
Position
2678431..2679381
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AA seq
316 aa
AA seq
DB search
MSEDLSKLHTSRMNKLQRKLRGEVGKAIGDYNMIEEGDRVMCCLSGGKDSYAMLDILLNL
QQRAPIKFEIVAVNLDQKQPGFPEEVLPAYLDTLNVPYHIIEKDTYSVVREKIPEGQKTC
SLCSRLRRGTLYGFAQKIGATKIALGHHRDDIIETLFLNMFFAGKQKAMPPKLLSDDGAN
MVIRPLAYSREKDIAEYAELKAFPIIPCNLCGSQENLKRAEVKDMLNLWDEHHPGRIESI
FTAMQNTSPSQGVDREQFDFNSLQRDADAPLRGDVAESDLPAFDFVDVANNGHIDLDAAA
KSRSENKIDIVSTYTP
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagatctttccaaactacacacctctcgaatgaacaaacttcagcgtaagcta
cgcggtgaagtgggtaaagcgattggcgattacaatatgattgaggaaggtgatcgggtc
atgtgttgcctttccggcggaaaagacagctatgcgatgcttgatatcctgctcaacctt
caacaacgcgcacccatcaagtttgagattgttgctgtcaatctggaccagaaacaaccg
gggtttcctgaagaggtgttgccggcttatctggatactctgaatgtgccgtatcatatt
attgaaaaagacacctactcagtcgtcagagagaagatccctgaagggcaaaaaacctgt
tcattatgttctcgattacgtcgcggtaccttatatggcttcgcacaaaaaatcggtgcg
actaaaatcgcattagggcaccacagagatgacatcattgaaactctgtttttgaatatg
ttttttgccggaaaacagaaggccatgcccccaaaattgttgtctgatgatggtgctaac
atggttatccgtcctctggcttattcccgcgaaaaagatattgccgagtacgccgaactc
aaagctttcccgatcattccctgtaatctttgtggctcacaagaaaacctgaagcgtgcc
gaagtcaaagatatgcttaatctctgggatgagcaccacccggggcgaattgagtctatc
ttcacggcgatgcagaacacctctccttcacagggtgtagaccgcgagcagtttgacttt
aactctctgcaaagagatgcagatgcgccacttagaggggatgtggccgaatcagatctt
ccggcattcgattttgtcgatgtggctaacaatggtcatatcgatctggatgctgcagcc
aagagtcgcagtgaaaataaaatcgacatcgtgagtacttatactccttag
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