Shewanella sediminis: Ssed_2248
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Entry
Ssed_2248 CDS
T00596
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sse
Shewanella sediminis
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sse02000
]
Ssed_2248
Transporters [BR:
sse02000
]
Other transporters
Pores ion channels [TC:
1
]
Ssed_2248
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
ABV36857
UniProt:
A8FVI4
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Position
complement(2710844..2713177)
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AA seq
777 aa
AA seq
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MLMKPSSVAIAITMAIASSQVHANEDESGTTEQPEIKKSKSSLIERIEVTAQKRLQSADD
IGMPIAAFSSQQMKDLGINNAIDITKFTPGVVYSETSAVGVPIYTIRGVGFDDYSTAANS
TVGIYVDEVSLPYPIMTRGLQFDVQRVEILKGPQGDLYGRNSTGGAFNFISNKPTQDFEL
GVNLEYGSYQRVKTDGFINGGLTNNLSARFSFATLNEGEGWQTHAVTGEDNGAQDQLGYR
LLVNWDLSSDASLLFNVHGGRDKSENSVPQAFAYRPLVPGFGTVPTDIDKINLNDSSSAS
WGVSDFEGTSPIETKRDSNSFGASVTLDWALNDNLSLTSITAYEEFDRKDGNDWDGSDLR
STDVYNDSDIQAISQELRLSADNGEDFSWIVGAYASSDSVKESFFSDVVQASNSDFTWIA
PDMYLQYVDTRYEINTKTAALYGHTEWDFAEDWTLILGARYTAEERELLDACTYDVEGAL
TPILGTGPGDCGTVNPETGMTETFSDELSVSNLSGKVGINYKLNQDVLLYGLVSNGFKSG
GYQGAHASSTSQWGPYDEEILNAAELGFKSVLLNNTMKVNASVFNYWYKDKQVQDTLVDP
LFGPLSVIINLEESEIRGAEIEWVLNPLDGLDLRVSGTWLDTEVIEGTGINLETLEPMDL
AGQKLTNSPELQWSALISYEAEIGDDWLLRSQLDGFYSDSSFSYLTNDPELNTLESYTVA
NLRFALLQSDGAWEVSAFVRNLTDESYYTSSSYANDIYSRSMARPRTFGVGFSYSFY
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgaaaccaagttctgtagccatcgccatcacgatggcaatcgcgtcaagccag
gtacacgcgaatgaagatgagtcgggcacgaccgaacagcctgagattaaaaaatccaag
agttcgctaatagaaagaattgaggtaacggcgcagaagcgactccaatctgccgatgac
atcggtatgcctatcgcggcatttagctcgcagcagatgaaagatctgggcatcaacaac
gccatcgatatcaccaagtttacccccggggtggtttattctgaaacctccgcggttggc
gtcccaatctacactattcgcggtgtgggctttgatgactacagtaccgcagcaaactcg
acggtcggtatttatgtggatgaagtgagtctgccttaccccattatgacccgtggactg
caatttgatgtgcaacgtgtggagatcttaaaagggccgcaaggagatctgtacggcaga
aacagcacggggggcgcgtttaactttatcagcaacaaaccgactcaggattttgaactg
ggcgtgaacctggagtacggcagttaccagagagtgaagaccgacggttttatcaatggc
ggtttaaccaataacctgagtgctcgcttctcctttgctaccctcaatgagggggagggt
tggcaaacccatgcagtaacaggtgaagataatggcgcgcaggatcagctgggataccga
ttattagttaactgggacctctcttccgatgccagtttactctttaatgttcacggcggc
agagacaaatcggagaattccgttcctcaggcatttgcttatcgtcctctggttccaggc
ttcggtaccgtccccacagatattgacaaaataaatctcaatgattcaagtagtgcctca
tggggagtatcggattttgaagggacatcaccgatagaaaccaagcgtgacagcaatagt
tttggtgcatcggtcacgctcgattgggcattgaatgataatttgtcactcacctcaatc
acggcttatgaagagtttgatcgaaaagacggcaacgattgggatggcagcgatctgcgc
agcacagatgtgtataacgacagcgatattcaggccattagccaggagttacgcttatca
gcggataatggtgaagacttttcttggattgtcggcgcctatgcctcctcagactcagtc
aaagagagctttttctccgatgttgttcaggcgagtaactctgatttcacatggatagca
cccgacatgtaccttcagtatgtcgatacaaggtatgagatcaataccaaaacagcggcg
ctatatggccataccgaatgggattttgcagaggattggacgctaattctcggtgcacgt
tacacggctgaggagcgtgagttactcgatgcgtgtacctatgatgtggaaggcgcgtta
acgccaattttgggcaccggaccgggcgattgcggtacggtaaacccggagaccggaatg
acagaaacattcagcgatgagctatctgtaagtaacctgtcaggaaaagtcggtatcaat
tacaagcttaaccaggatgtattactctatggcttagtcagtaatggttttaaatcaggt
ggttaccagggagcccacgcatcatcgacctcacaatgggggccgtatgatgaggagatc
cttaatgctgccgagctaggcttcaaatcggtcctactcaataacaccatgaaggtaaac
gcctccgtatttaattactggtataaggataagcaggtacaagataccctggtcgatccc
ctttttggtcccttgagtgtcatcataaacctggaagagagtgagatccgcggcgccgaa
atcgaatgggtattgaatccactcgatggcttagatctgcgagtctcaggcacctggctt
gatactgaagtgatagagggaaccgggatcaacttggaaaccttagaacctatggacctt
gcaggacagaaactgaccaattcgccagagcttcaatggtcagcacttatttcatatgaa
gctgaaattggtgacgattggctacttagaagccaactagatgggttttatagcgactca
tccttctcttacctgactaacgatcctgagctgaacacccttgagagttataccgtggca
aatctacgttttgcattacttcaatctgacggggcatgggaagtatccgccttcgttcgc
aacttaaccgacgagtcctattacacctcttcatcctatgctaacgacatctattctcgt
tcgatggcgcgtccacgtactttcggggttggttttagctacagcttttattaa
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