Shewanella sediminis: Ssed_2328
Help
Entry
Ssed_2328 CDS
T00596
Name
(GenBank) transketolase, central region
KO
K00167
2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:
1.2.4.4
]
Organism
sse
Shewanella sediminis
Pathway
sse00280
Valine, leucine and isoleucine degradation
sse00640
Propanoate metabolism
sse00785
Lipoic acid metabolism
sse01100
Metabolic pathways
sse01110
Biosynthesis of secondary metabolites
sse01210
2-Oxocarboxylic acid metabolism
Module
sse_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
Ssed_2328
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Ssed_2328
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Ssed_2328
Enzymes [BR:
sse01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.4 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring)
Ssed_2328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transket_pyr
Transketolase_C
PFOR_II
Transketolase_C_1
Motif
Other DBs
NCBI-ProteinID:
ABV36937
UniProt:
A8FVR4
LinkDB
All DBs
Position
complement(2826099..2827076)
Genome browser
AA seq
325 aa
AA seq
DB search
MAKINMLQAINDALSLVLETDDKAILFGEDVGHFGGVFRATSGLQEKYGKERCFNTPLTE
QGIAGFANGLASNGMTAIAEIQFADYIFPAIDQIVNESAKFRYRSGNEFNVGGITYRTPY
GGGIAGGHYHSQSPEAYFTQTAGLKVVVPRNAYQAKGLLLASIRDKNPVVFFEPKRLYRA
NIGEVPDGDYEIELGKAEVVREGKDITLLAWGAQMEIIEEAADMATKQGISCEVIDLRTL
APWDIETVAASVKKTGRLLINHEAPLTGGFAGEIAATIQEECFLYLESPISRVCGLDTPY
PLIHEKEYMPDALKTFEAIKATVKF
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaaattaatatgttacaagccatcaatgacgcgctttcacttgtattggagact
gacgataaggccattttgtttggtgaagatgtcggacatttcggtggagtatttcgtgcg
acttccggtctgcaggaaaaatacggaaaagagcgttgcttcaataccccattgactgag
caggggatcgccggtttcgcaaatggattagcctctaacggaatgacggcgatagccgag
attcagtttgccgattatatttttccggccatcgatcaaattgtgaatgaatcggctaaa
ttcaggtatcgcagtggtaatgaatttaatgtgggtggcattacctaccgtacaccttac
ggtggcggtatagccggcggccattatcattctcagtctccggaagcttattttacccaa
actgcgggtttaaaagtcgtggttccgcgtaatgcctatcaggctaaaggcttattactc
gcctctatccgagataaaaacccggttgttttttttgagcctaagcgtctctatcgcgcc
aacattggggaagtgcccgatggcgattatgaaattgagctaggcaaggcagaagtcgtc
cgcgaaggtaaagatatcactctgctcgcgtggggggcccagatggagatcatcgaagag
gcggccgatatggcgacaaagcaggggatatcctgtgaagttatcgatctgagaaccttg
gcaccttgggatatagaaaccgtagcagcctctgttaagaagactggtcgactgctgatc
aatcacgaagcaccattaacgggtggctttgccggagagatcgcagccacgatacaggag
gagtgttttctctatcttgaatcgccaatcagtcgtgtttgtggtttggataccccgtat
ccattgatccatgagaaagaatatatgccagatgcgctgaagacgtttgaagcgattaaa
gcaacggtcaaattttag
DBGET
integrated database retrieval system