Shewanella sediminis: Ssed_2344
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Entry
Ssed_2344 CDS
T00596
Name
(GenBank) transcriptional regulator, AraC family
KO
K23237
AraC family transcriptional regulator, melibiose operon regulatory protein
Organism
sse
Shewanella sediminis
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sse03000
]
Ssed_2344
Transcription factors [BR:
sse03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Ssed_2344
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
Cupin_2
Phage_TAC_19
DUF6262
Motif
Other DBs
NCBI-ProteinID:
ABV36953
UniProt:
A8FVT0
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Position
complement(2851080..2851955)
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AA seq
291 aa
AA seq
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MLDWVQKIAFSDSSPLETQGMEHKFGFRRLQPKVMPHSHWHGHIEINYLFNCSADYLING
KKISVPEGRMLLFWASFPHQMTATYGEGDLVNVYVPLQAFLTWKLPNEFVSQLLHGEVLV
SDSLYACDEQITQIWEKDLLKNNHMMTVQVINEIRGRIRRMSLENYSTYDLANKACNDNN
APTLSGLTHIQAMLRYIADNYDQKITIADVANSTGLHKNYAMKLFNRVMRVSIKQYINQL
RLQHAQALLVDTENPVLNIALEAGFGSVSRFYDIFQREYNMSPLEFRRCVL
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgttggattgggttcaaaaaattgccttcagcgacagtagtcctctcgaaacccagggg
atggaacataagtttggcttcagaaggcttcaacccaaggtgatgccccatagccattgg
cacggacatatagagattaactatctatttaactgctcagcagattatctgattaacggt
aagaagataagtgtgccagaaggacgtatgttgctgttttgggcctcctttccacaccag
atgaccgcgacatacggcgagggcgatctggttaatgtctatgttcccttgcaggcattt
ttaacatggaagcttcccaatgagtttgtcagtcagcttttgcatggtgaggtattagtt
tccgatagtttgtatgcctgtgatgaacagatcactcagatctgggaaaaggatctgttg
aaaaataatcacatgatgacggtacaggttatcaatgaaattcgtggtcggatccggcgt
atgtcgctggagaactacagcacctatgatctggcaaataaagcgtgtaatgataataac
gcgcctaccttgagcggattgacccatatccaagccatgctgcgttatatagctgacaat
tatgatcagaagatcactattgccgatgttgctaactccacggggttacataaaaactat
gcgatgaagttgtttaatcgtgtcatgagggtttcaattaaacaatatataaatcagctg
cgtttgcaacatgctcaggcactgttagtcgacaccgagaatcctgtattaaacatcgct
ttagaggccggttttggttccgtgagccgattttatgatatttttcagcgtgaatataat
atgtcacctttagagttcaggcggtgcgtcttgtag
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