Shewanella sediminis: Ssed_2358
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Entry
Ssed_2358 CDS
T00596
Name
(GenBank) hydrolyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit
KO
K01676
fumarate hydratase, class I [EC:
4.2.1.2
]
Organism
sse
Shewanella sediminis
Pathway
sse00020
Citrate cycle (TCA cycle)
sse00620
Pyruvate metabolism
sse00720
Other carbon fixation pathways
sse01100
Metabolic pathways
sse01110
Biosynthesis of secondary metabolites
sse01120
Microbial metabolism in diverse environments
sse01200
Carbon metabolism
Module
sse_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sse_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sse_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Ssed_2358
00620 Pyruvate metabolism
Ssed_2358
09102 Energy metabolism
00720 Other carbon fixation pathways
Ssed_2358
Enzymes [BR:
sse01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.2 fumarate hydratase
Ssed_2358
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fumerase
Fumerase_C
Motif
Other DBs
NCBI-ProteinID:
ABV36967
UniProt:
A8FVU4
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All DBs
Position
complement(2870484..2872022)
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AA seq
512 aa
AA seq
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MSVEKEVSVTKEVIIKQADLIESVADSLQYISYYHPKDFVDAMSEAYDREESAAAKDAIA
QILINSRMSAEGKRPLCQDTGIVTCFVKVGMGVKWDKTDMTVQQMVDEGVRRAYQNPDNP
LRASIVSDPAGARKNTKDNTPSVVHIDMVPGDHIEVAIAAKGGGSENKSKMAMLNPSDDV
AAWVEKTLPTMGAGWCPPGMLGIGIGGTAEKAAVLAKESLMDPVDIHELQAKGAETAEEK
LRLDIFERSNKLGIGAQGLGGLTTVLDVKIKSVPTHAASKPVVMIPNCAATRHVHFHLDG
TGPAVLTPPSLEDWPVITREAGENTHHVDLNSVTQADIETWKSGDTLLLNGKMLTGRDAA
HKRIQTLIESGEGLPEGVDFTGKFIYYVGPVDPVGDEVVGPAGPTTATRMDKFTDMMLEK
TGLMGMIGKAERGPATVASIKKNKAVYLMAVGGAAYLVSKAIKTSRVVAFADLGMEAIYE
FDVKDMPVTVAVDSNGVNAHETGPAIWKLKLS
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttgaaaaggaagtgtctgtgactaaagaagttatcataaagcaagccgatcta
atcgagagcgttgccgattccctacaatatatctcctattatcaccccaaagattttgtc
gatgctatgtcagaagcctatgacagagaagaaagtgcagccgcaaaagatgccattgca
cagatcttaattaactctcgtatgtcggcagaaggaaagcgtcctctgtgccaggacacc
ggtatcgttacctgttttgttaaagtgggtatgggtgttaagtgggataagactgatatg
acggttcagcagatggtcgacgaaggcgtcagacgtgcgtatcagaacccggataaccca
ttaagagcctcaatcgtttcagaccctgccggggcgcgtaagaataccaaggataatacc
ccctctgtcgttcatatcgatatggtgcccggggatcatattgaggttgcaatcgcggct
aagggcggcggttctgaaaataaatctaagatggcgatgctcaacccttcagatgatgtt
gctgcatgggttgagaagacactgccgacgatgggcgcgggctggtgcccaccaggaatg
ctgggtattggcatcggcggaaccgcagagaaagcggcggtactcgctaaagagtctctg
atggatcccgtcgacattcatgaactacaggcaaagggcgccgaaacggccgaagagaag
ttgcgtctggatatcttcgagcgctctaataagttaggcatcggtgctcagggcctcggc
ggtttgaccacggttctggatgtaaagattaaatcggtaccgacacacgcagcctctaag
cctgttgtgatgatcccgaactgcgcagccacacgtcatgttcattttcacttagatgga
acgggtcctgcagtattaacgcctccatcgttagaagattggcctgtgatcacccgtgaa
gcgggtgagaacactcaccatgtcgatctcaacagtgtgacacaagccgatattgaaacg
tggaagagtggcgataccttgctacttaacggcaagatgttaaccggccgtgatgctgcc
cataagcgtattcaaaccctaattgaaagcggtgaaggtctgcctgaaggcgtcgatttt
accggtaagtttatctattacgtagggcctgtggatcctgtcggtgatgaagttgtgggc
cctgcgggtccaacgacggcaacgcgtatggataagttcaccgatatgatgctggagaaa
acgggcctgatggggatgataggtaaagccgagcggggacctgcaacggttgcatccatc
aagaagaataaagcggtttacctgatggctgtgggtggcgccgcctatctggtatcgaaa
gcgattaaaacctcccgtgttgtcgcatttgccgacttaggtatggaagctatctatgag
tttgacgttaaagatatgccggttactgtggctgtagactccaatggggtcaacgctcat
gagactggcccggctatctggaaacttaaactcagttaa
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