Shewanella sediminis: Ssed_2371
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Entry
Ssed_2371 CDS
T00596
Name
(GenBank) flp pilus assembly protein, secretin CpaC
KO
K02280
pilus assembly protein CpaC
Organism
sse
Shewanella sediminis
Pathway
sse02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Ssed_2371
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sse02044
]
Ssed_2371
02035 Bacterial motility proteins [BR:
sse02035
]
Ssed_2371
Secretion system [BR:
sse02044
]
Type II secretion system
Tight adherence (Tad) export apparatus
Ssed_2371
Bacterial motility proteins [BR:
sse02035
]
Pilus system
Pilus assembly proteins
Ssed_2371
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Secretin
T2SS-T3SS_pil_N
BON
SANTA
Motif
Other DBs
NCBI-ProteinID:
ABV36980
UniProt:
A8FVV7
LinkDB
All DBs
Position
complement(2884851..2886302)
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AA seq
483 aa
AA seq
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MPRTITRMVTIACCFLTVCLVFINFSVNAGGPTGASRDIKHIPIFKSRVLKLKQAIHRVS
VGNPNIGDIKLLPNNELYVLGKKLGSTNIMVWDKNEQLVDVIDIEITHDLNGLKTRLHEF
LPGEKLGVQTSQGQLLISGQASNLQKMNTAVELAQAYADAASVSKVKSTVLNMMTVGGDH
QVMLEVVIAEVQKEVARQFDSKFFIFNKGDKGFIGTAGAGGTFDLDPAAAIDSRGFFARY
LDGNLMMNFALDVAKQHGLAKVLAEPNVTAMSGQSAEFLSGGEFPIPVPGTNGSTTIQYR
DFGVGVKFVPSVLDSGQINLNLNVMVSEVSNANSVTLSGGSNTALVVPSIVKRTTATTVE
LADGQTIAISGLISDTLRENIDKLPGLGDIPILGQLFTSKSFQSGQSELVILVTPRLVRP
FNKKQISLPTDDFVLPSDMEFYLLGKMSHKQSEQEKHETPYEAIESDAKIDDSGTQQKYG
HSL
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgccacgaacaataaccagaatggttacgatagcatgttgttttttaactgtatgtctt
gtttttatcaatttttcagtcaacgctggcggtccaactggagcgagccgggatatcaaa
catatcccgatttttaagtcacgggtattaaaactaaagcaagcgattcatcgggtatct
gtaggtaatcccaatataggtgatatcaaacttcttcctaataatgaattgtatgttctg
ggaaaaaagttgggtagtaccaatatcatggtctgggataagaatgagcagttagtcgat
gtgatcgatattgaaattacccatgatctcaatggattgaaaacccgcttgcatgagttt
ctgccgggggaaaaattgggtgtacaaacctcacaaggccaattgctgataagtggccaa
gcgagtaacctccaaaaaatgaatacggcggtcgaactggctcaggcctatgcagatgcc
gcatctgtttctaaagtgaaaagtacggtgttaaacatgatgacagtagggggagaccat
caggttatgctcgaagtcgttattgccgaagttcaaaaagaggtcgcccgtcaatttgat
tcaaaattctttatctttaacaaaggcgataaagggtttattggtacggctggtgccggt
ggaaccttcgatcttgaccccgctgcagccatagacagtcgtggattctttgctcgttat
ctcgacggcaatttaatgatgaactttgctctcgatgttgctaaacaacatggtcttgct
aaagtcctggctgagcctaatgtaacggcaatgagcggacaatcggcagagttcttatcg
gggggagagtttcctattccggttccgggcaccaatggttcgacaacaatacagtacaga
gattttggtgtaggcgttaagtttgtgccatcggtgttagattcagggcaaattaatctt
aacctcaatgtaatggtaagtgaagtcagtaacgctaactcggttacactttccggtggc
tctaataccgctcttgttgtgccttcaatagttaagagaacgacagcaacaaccgttgaa
ttggccgatggacaaaccatcgcaatcagtggactcattagtgacactttacgtgaaaat
atcgataaattaccggggctcggagatattcccatcttaggtcagctatttaccagtaaa
agttttcagagtggacaaagcgaactggttattctggtaacacccagattagttagaccg
tttaataaaaagcagatatcactgccaaccgatgattttgtcttgccatctgatatggag
ttctatctgttaggtaaaatgtcgcataagcagtccgaacaagagaagcatgaaacgcct
tacgaagcgatagagtccgatgcgaaaattgatgacagcggaactcagcaaaaatatgga
cattcactatag
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