Shewanella sediminis: Ssed_2418
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Entry
Ssed_2418 CDS
T00596
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
sse
Shewanella sediminis
Pathway
sse00300
Lysine biosynthesis
sse01100
Metabolic pathways
sse01120
Microbial metabolism in diverse environments
sse01230
Biosynthesis of amino acids
Module
sse_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Ssed_2418
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sse01002
]
Ssed_2418
Enzymes [BR:
sse01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
Ssed_2418
Peptidases and inhibitors [BR:
sse01002
]
Metallo peptidases
Family M20
Ssed_2418
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Peptidase_M18
Motif
Other DBs
NCBI-ProteinID:
ABV37027
UniProt:
A8FW04
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All DBs
Position
2939333..2940463
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AA seq
376 aa
AA seq
DB search
MSQDVLTLAQDLISRESVTPLDEGCQQLMADRLSAKGFDIESMVFDDTTNMWARRGNSGP
LFCFAGHTDVVPVGDLNRWHTPPFDPVVIDGYLHGRGAADMKGSLAAMLVATERFVEKHP
DHNGSIAFLITSDEEGPFINGTTRVIDTLEARNEKITWALVGEPSSTHKLGDIVKNGRRG
SLTGNLTVNGIQGHVAYPHLADNPIHNAAPALDELARMKWDNGNEFFPPTSFQIANINGG
TGASNVIPGSLEVMFNFRYSTEVTAEELIKRVLNILDAHGLDYDISWTFNGLPFLTGEGP
LLDATRDAIKQVTGTDTDPQTSGGTSDGRFIAPTGAHVIELGPVNATIHKVNECVKVADL
EQLALCYEVILEKLLC
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaggacgtattaacgcttgcccaagatcttatctctcgtgagtctgtcactccc
ttagatgaaggctgccaacaactgatggccgaccgattgagtgccaaaggcttcgatatc
gaatccatggtctttgatgatacaaccaacatgtgggcgagacgtggtaatagcgggcct
ctattctgttttgcgggtcacaccgatgtggttcccgtgggcgatctgaatcgctggcat
acccctcctttcgatcctgtcgttatcgatggataccttcacggtcgaggcgccgcagat
atgaaaggctcactcgctgccatgttggttgccaccgagcgttttgtagagaagcacccg
gatcataacggatcaattgcctttttaattaccagtgacgaagaggggccatttatcaat
gggacaactcgggtcattgatacacttgaggcccgtaacgagaaaataacctgggcacta
gtcggtgagccctcttccacccataagctgggtgatatcgttaaaaatggccgcagagga
agtctgacaggcaacttaacggttaacggtatccaaggccatgttgcatatcctcacctt
gccgataatccaattcacaacgcagccccagccctcgatgagttagcccgcatgaagtgg
gataatggcaatgagtttttcccgccaaccagtttccaaatagccaatatcaacggtggt
accggcgcatcaaatgttattccgggttcactggaggtcatgtttaacttccgctactcg
acagaagtgaccgctgaagagttgattaagcgagtgctcaacatactcgatgcccatgga
ctggattatgacattagttggaccttcaatggcctccctttcctcaccggagagggccca
ctactcgatgcaacgagagacgcgataaaacaagtgacgggcactgataccgaccctcaa
acctctggtggcacttccgatgggcgctttatcgcaccgacaggcgcacatgtcatcgaa
cttggccctgtcaatgcgaccattcacaaagtgaacgagtgtgtaaaagtcgccgatctc
gaacaactcgccctttgttatgaagtcattttggaaaagctactttgctaa
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