Shewanella sediminis: Ssed_2434
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Entry
Ssed_2434 CDS
T00596
Name
(GenBank) transcriptional regulator, LysR family
KO
K05596
LysR family transcriptional regulator, chromosome initiation inhibitor
Organism
sse
Shewanella sediminis
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sse03000
]
Ssed_2434
03036 Chromosome and associated proteins [BR:
sse03036
]
Ssed_2434
Transcription factors [BR:
sse03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Ssed_2434
Chromosome and associated proteins [BR:
sse03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
Ssed_2434
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
P22_Cro
Motif
Other DBs
NCBI-ProteinID:
ABV37043
UniProt:
A8FW20
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All DBs
Position
2956387..2957274
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AA seq
295 aa
AA seq
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MIDYAHLRALSIVISEGGFDRAAKVLCITQPAVSQRIKQLEERVGQALVIRSNPVEATPM
GKRLLRHYSQVQLLESELSVEMDADDPKLPTIVKIAVNADSLATWFLPALCEVFKRHQWL
LELIVDDESYTHNLLKNGEAVGCVTTTQAPLAGCSSEYLGQMEYLCVATPEFIQEYFPVN
VSQTSLEKAPAVVFSTKDKLHEKYLRKYFKMSPGSWREHKIPSSESFLDAIIQGLGYGLV
GHLQAEPLLEKGVLVEITPGKRKRVPLYWQHWNIKAKQTTIVYRSLAVTAKQSLC
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
ttgattgattacgcacatctacgcgccctttcaatcgttatatctgaaggagggttcgat
cgcgcggctaaggtgctctgtatcactcaacctgccgtttcccagcgaattaaacagctt
gaagagagagttggacaagccttagtgattcgttcaaaccctgtggaagcaacacctatg
gggaagagactacttcggcactactcacaagttcagcttctagaaagtgagttgagtgtt
gagatggatgccgatgaccccaaactccctaccatagttaaaattgccgttaatgccgat
agtctggccacttggttccttccggcactatgtgaagtatttaagcgccatcagtggcta
ttggaattgattgtcgatgatgaatcatatacccacaatctattgaagaatggtgaagct
gtgggctgtgtcactacaactcaggcaccactggctggatgcagcagcgaatacctggga
caaatggagtacctgtgcgtagcgacgccagagttcatccaagagtacttcccggtcaat
gttagtcaaacatcactcgaaaaggcccctgcggttgttttttcaaccaaagataagctg
catgagaagtacctacgtaaatatttcaagatgtccccgggaagttggcgtgaacataaa
atcccttcatcggagagctttctcgacgccatcatacagggattaggatatggactggtg
gggcaccttcaagcagaacctttgcttgaaaaaggcgtgcttgtcgagataacgccaggg
aaaaggaagcgtgtaccactctattggcagcactggaatattaaggccaaacaaacgacc
atagtatatcgttctctggcggtcacggcgaaacagtccctttgctag
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