Shewanella sediminis: Ssed_2465
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Entry
Ssed_2465 CDS
T00596
Name
(GenBank) putative pore-forming cytotoxin integrase
KO
K14059
integrase
Organism
sse
Shewanella sediminis
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
Ssed_2465
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Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_3
Phage_int_SAM_4
Phage_int_SAM_5
Int_N
Phage_int_M
Phage_int_SAM_1
Motif
Other DBs
NCBI-ProteinID:
ABV37074
UniProt:
A8FW51
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Position
complement(2990548..2991693)
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AA seq
381 aa
AA seq
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MVNMMEKFNDYAKQYLAESKFDKAHSTYVSECSKVKNLVSFFGKKQIRSISQSDIKRWKI
KVHRRFSNKTINEHFTILRAIFSCALSDCVLGRNPMTGVENLKIHTAEPKPLGREELLKL
HATPAQCESGKALLFLGVLTGLRISELIALTWDCIDFESREIKVHTAKVLGKYKVPKTTS
SIRTVEMNQHAFALLKKHYEVTGSLRPRVIRVLQNDNKTIEKRRVQHLFINSQSNKPFID
SKQYSKTFFTPFLVKASVQHRGPNQLRHTFASQCLTAGISKEWIARQLGHNSTNMVDKHY
ARWLQSDAPDNAAKYSDAMGSVFAEPSVKQPFDSKSVPTIVASTWSQLQPKGPFSALNMG
PLREGLPGAFKVQRRGGLTHV
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggtcaacatgatggaaaagtttaacgattacgcaaagcagtatttagcagagagcaag
tttgataaagcacattcaacctatgtgagtgagtgctcgaaagttaaaaatttagttagt
ttttttggcaaaaaacaaattaggtcaataagccaatcagatataaaacggtggaaaatt
aaagttcatcgacgttttagcaataaaaccataaacgaacattttacaattctcagagct
attttttcttgtgcattaagtgattgtgttttgggtcgtaacccgatgactggggttgaa
aaccttaaaatacataccgctgagccaaaaccattgggacgtgaagagcttttaaagctt
catgctacacctgcccaatgtgaaagtggtaaagcactgctgtttctaggcgtgctaaca
gggttacgaattagtgaactcatagctctaacttgggattgtattgattttgaatcgaga
gaaatcaaagttcatacggcaaaagtcttgggcaaatacaaagtccctaagactactagt
tcaatcagaactgttgagatgaatcagcacgcattcgcgctattaaagaaacactatgaa
gtcactggttcgcttaggccccgtgttattcgggtgcttcagaatgataacaagacaatt
gaaaaacgacgtgttcaacatttgtttatcaattctcagagcaataagccattcatcgac
tctaagcagtattcaaaaacattcttcactccttttttagtcaaggcttcagtacagcac
agaggtccaaatcaattacgccacacgtttgctagtcagtgtttaactgctggaattagt
aaagagtggattgcgagacaacttggtcataactcgacgaacatggtcgataagcattac
gctcgctggcttcaaagtgacgcaccagataatgccgcaaaatatagtgatgctatgggg
tctgtttttgctgaaccgtcagtcaagcagccgtttgatagcaagtcggtaccgactatc
gtcgcatcaacctggagtcagcttcaaccaaaaggtccattttccgctttaaacatgggg
ccgcttcgtgaaggtctgcctggtgcattcaaagttcagcgtaggggaggcctgactcat
gtttga
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