Shewanella sediminis: Ssed_2502
Help
Entry
Ssed_2502 CDS
T00596
Name
(GenBank) collagenase-like protein
KO
K08303
U32 family peptidase [EC:3.4.-.-]
Organism
sse
Shewanella sediminis
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sse01002
]
Ssed_2502
Peptidases and inhibitors [BR:
sse01002
]
Peptidases of unknown catalytic type
Family U32
Ssed_2502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_U32
DUF3656
Motif
Other DBs
NCBI-ProteinID:
ABV37111
UniProt:
A8FW88
LinkDB
All DBs
Position
3044078..3046318
Genome browser
AA seq
746 aa
AA seq
DB search
MKNQFELLAPGGDIDSIKAAIVAGADAIYCGLDHFNARTRAANISFDDLNGILRLAHKSD
CQIFLTLNIIILESELPALIRLLNELVNTGIDGVIIQDLGLFYILSRYYKTLDVHASTQV
TTHNEGQILFLNKLGAGRTNLSRELNIDEIKQLTKVSHQNDMMTEVFVHGSNCIGFSGLC
YISSAHGGNSGNRGRCSQPCRDQYQTTRAGKDFPLNLKDNSAFSDIAALGDAGVDSLKIE
GRIKKFDYVYTVVSSWREQIQRYCQHKSIKSDNEDLYKVFNRDFTNAYLKGDINKNMFID
NPRGNSVQHFTAIKGYNTEVEIQSVKQSLYDEKTVLIQTVEEKIKELNIGKTPLTIRVSG
KLNTPLTVSVETPDKEFTVHSDTNLFKAGKYTLDNACIKQRFKSLNNAKHEIAELNTEQL
NADLLISFKELTVLKHRIEYLLNDEKALIEPITLTKLPKQRHSAKASLSALISSTKDLDL
CDTGNAEIYYQLPDCIESQYSQLIELFSNNARLIPWFPSILIGEDYRAGVKLLKTIKPKL
IVTNNTGIAQAAFENGIDWIAGPYLNITNSYSLLAMKEEFNCYGSFISNEINRKQIKHIA
GCSDMKLYYSIYHPILLLTSRQCLFHQTTGCHKESMDADCLTECKKSVSIMNLKDTAFVI
DKQTGEHNNMYGSQHFLNTEIVSDIPDMFSSFFIDLRGIRTNTRAGRDKSTIVRLFQMLL
EGQSEAEAELHQLIGHTIDTQYKKGL
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaccaatttgaattgctggcacccggtggcgatatagattcgataaaagccgcc
attgtggcgggcgccgatgctatctattgcggtttagatcatttcaacgcgagaacccga
gcggcaaatatctcattcgatgacttgaacggtatcttaaggctggctcataagagcgac
tgccaaatattcctgacgctgaatatcatcatcttagagagtgagctcccggcgttaatc
cgcctgctcaatgaactggttaacacaggtatcgacggcgtcataattcaagacttaggc
ctgttttatatcctctccaggtactataaaaccctcgatgtacacgcatcaactcaggtg
acgacacacaatgagggccagatattatttctgaataagctgggtgcaggcagaacaaac
ctttcccgcgaattaaacatcgacgagattaaacagctaacaaaagtctctcatcagaac
gatatgatgacagaggtgttcgttcacggctctaactgtatcggcttctccggactgtgc
tatatcagctcagcccatggcggtaactcaggcaaccggggacgctgcagtcagccatgc
agggaccagtaccaaacgactcgagcaggtaaagatttccccctgaatctcaaagacaac
tccgcattctcagatattgccgcgctcggtgacgccggtgtcgactcgttgaagatcgaa
ggccgtattaagaaatttgactacgtctataccgtagtcagcagctggagagaacagata
cagcgctattgccagcataagagcataaagagtgacaatgaagatctctataaggttttc
aaccgagactttaccaacgcctaccttaagggtgatattaataaaaatatgtttattgat
aatccaagaggcaactcggttcaacattttaccgccatcaaaggttataacactgaggta
gagatccagtcggttaagcaatccctctatgacgaaaaaacagtcctaattcaaaccgtc
gaagagaagataaaagagttaaacattggaaaaacgccgctgacaatcagagtttccggt
aaattaaacacgcccttaaccgtgtcggtggagacaccggataaggagtttacagttcac
tcagacacaaatctgttcaaagccgggaaatacaccctcgataacgcctgtatcaagcaa
agattcaagagcctgaacaacgcgaaacatgagatagctgagcttaataccgaacagctc
aatgcagacctgctaatctcgtttaaagagctaaccgttttaaagcatcggatcgagtat
ctgctcaatgatgagaaagccctcatcgagccgataacactgaccaaactgccgaaacag
cgacactctgccaaagcgagtctgtcggcgctgatctcatcgactaaagatttagatctc
tgtgataccggcaatgcagagatctattaccagcttccggactgtatcgagagccaatac
agccaacttatcgaactgttttctaacaatgcgcgtttaatcccctggttcccgtcgatt
cttatcggtgaagactatcgggcaggtgtaaagctgttaaaaacgattaagccaaagctg
atagtgaccaacaacacaggcattgctcaagccgcatttgaaaacggaatagattggatt
gcggggccctaccttaacatcaccaactcatatagcctgttggcgatgaaggaggagttt
aactgttatgggtcatttatatccaacgaaattaacaggaaacagataaaacacattgca
ggctgcagtgacatgaagctgtattacagcatctatcacccaatcttgctgttaaccagc
agacagtgtttatttcatcagactacaggttgtcataaagagtctatggatgccgactgc
ctgaccgaatgcaagaaatctgtctctatcatgaatttaaaggataccgcttttgtcatc
gataagcagacgggtgagcacaacaacatgtatggcagtcagcacttcctaaatactgag
atagtgagcgatataccagatatgttcagcagcttttttatcgatctcagaggtatcaga
accaatacccgagccggacgggataaatcgacaatagtacgtctttttcaaatgctgctc
gaaggtcagagtgaggcagaagctgagcttcaccaactgattggccacactatcgacacc
caatataaaaaggggctgtaa
DBGET
integrated database retrieval system
