Shewanella sediminis: Ssed_2511
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Entry
Ssed_2511 CDS
T00596
Name
(GenBank) protein of unknown function DUF490
KO
K09800
translocation and assembly module TamB
Organism
sse
Shewanella sediminis
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sse02000
]
Ssed_2511
Transporters [BR:
sse02000
]
Other transporters
Pores ion channels [TC:
1
]
Ssed_2511
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
ABV37118
UniProt:
A8FW95
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All DBs
Position
3053146..3057105
Genome browser
AA seq
1319 aa
AA seq
DB search
MTQPTRETGINQAETPSDSTDAAPKNSLARTLWKSFKAVSRTIIYLPLGMLIILAILLGT
PLGSRLAVALADIFVPDLDITYVSGTLNKRLETTDVHWSMEGIAVDVDDLILDWRPMCLL
SKQLCVNELAASKVLVSIDTDKLGDQNLVDEELTGLKGATEVDSGKQGFPDNQLNDSQLK
DYPSNQNQEIQLPFGIDLKRADLANVKVRVNDMQFNASRLQTQAQWQQTGIRAKYLHSND
LLVSIPLSSADKNAEIIEKANQTTQDEDTSWTMAHLPAVFMPIPVFVTDAVLEKSHLKLG
KRDDYFDNIVLDGSYHSFLVNLNQLHVEHTYGKVDLKGGITLKDDYPMDISATVDARSVA
ELPGLKLQQLSVHVSQGFKKLAVTATGKGHIDFNLQGDIGLAKRSLPYELKFESKAIGWP
LDAPNYSGKSISLITHGDLNSQDVILSGNIKTPFHPVLAVDTQFKHTGKQLDVDHLRVEG
ELGEAELSGSAQYEDGVSWDADINTVDFKMQQLKLNLETPLPDSIISGQFHTKGQVDSKR
WEVGIDNSDLEGEIQGYPFHLLGDINIDDKLHLKADSLKLSALQSVLSISGNADEAWAVN
AKLQIPDLSLWHTESSGSIDAFINVSGESEHPQVSVSAELFELQFQQHKIEQALAKGFYR
PKDNQEFALSVKAKELKLATVKLDSVTLGFKGNDTKQKLGLQTFGELQLNTKIYSRYDTK
TTQLEAEIRNLSLNSVLGKWALQAPIDVSWNNDKQTGLVNTFCWLNENGKLCLDDPAELS
KNGEASILFDGDIGGVLTPLLPENLTWQAPANLTSNIKWQEESKPEGYLELNLAPGQVSF
NNNNRVIDVGYRMLNFQASLDKDKLATQLKFDSHDIASWEGQLEVSVSPDRAISGYTKLD
QINLDALSELMPQLETLTGKISSELEISGTLAKPDISGKVQLENGHLLAAANPTPLENIE
LDLLLSGQKATLDGRWKMGEGEAKVTGLFDWRGDSFNGDIQFDGDKLAIIQPPLAIITAS
PALKIKFDKDRADIQGSIDIDSGNIKISQLPEGGVAVSDDVVFEDSISSGQVEQSPYAIT
TNIKIKVADRLRIDGMGLRGKLTGTLDLRQEAFRPPLLYGDIRVIDGSYKFMGQTLKINA
GEVQFIGPVEIPNLNIEAVREIKDEDVVAGIRITGTPLKPIVTLFSSPVKEQAEILSYII
KGTGFHSNDGDQNSSLMMGAALTLSNQLGGGTVNLIGESATGLIEKVGFSNVQLDANDDG
RVAISGYIGENLMVKYGVGVFNPGYEMTVRYYLLSQLYLETVSGTVEQSLDIYYNFNID
NT seq
3960 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagcccactagagagactggtattaaccaggctgaaactccgtcagatagtact
gatgccgccccaaaaaatagccttgcacggacactatggaaaagttttaaggccgtctcc
aggacgattatctatctgcctctgggcatgctgatcatccttgcaatacttttaggcacc
cccttaggtagcagactcgcggtggcccttgccgatattttcgtgcccgatctcgatatc
acctacgtctcaggcacgttaaacaaacgcctcgaaacgaccgatgtccactggagtatg
gagggtatcgcggtcgatgttgacgaccttatattagattggcgccccatgtgcctgctg
agcaaacagttatgtgtcaacgaactcgcagcaagtaaggtgttggtgtcgatagataca
gacaagctcggagatcaaaacctggttgatgaagagctaacaggacttaagggcgccacc
gaagttgatagcggcaaacaaggctttccggacaatcagcttaatgactctcagctcaag
gactatccgtcaaatcaaaaccaagagatacaactgcctttcggtatcgatctcaagcgg
gcagatttagccaacgtaaaggtgcgcgtcaacgatatgcagttcaatgcctcacgtcta
caaacacaggcacaatggcaacagaccggcatcagagccaagtatctgcacagtaatgat
ctgctggtatcgattccattatcttctgcagacaagaacgctgaaataattgaaaaggca
aaccaaacgactcaagacgaagacaccagctggaccatggcacacctgcccgccgtcttt
atgccgataccggtgtttgttaccgatgccgtcctggagaagagtcacctgaaactcggt
aagcgcgatgactatttcgacaacatcgtactcgacggtagttaccatagctttctggtg
aacctcaatcagctgcatgttgaacatacctatggcaaggttgatctcaagggggggatc
acactcaaagatgactaccctatggatatctcagccactgtcgatgcacgcagtgtagcc
gaactgcccggacttaagctgcaacagctttcggtccacgtatctcagggctttaaaaaa
ctagccgtgacggcgactggtaagggtcatatcgactttaacctgcaaggtgatatcggc
ctggcaaagagaagcctcccctatgagcttaaatttgagagtaaggccataggttggcca
ctcgatgcaccaaattactcgggtaaatcgataagtcttatcacccatggggatctcaat
agtcaggatgtcatcctctcgggcaacatcaagaccccttttcatcccgtgttggctgtc
gatacccaatttaaacatacaggtaaacaactggatgtagatcatctgcgagtggaagga
gagttgggagaagctgagctgtcaggcagcgcacagtatgaagatggggtaagctgggac
gccgacatcaacactgtcgacttcaagatgcaacagctaaaactaaaccttgaaacgcct
ctgcccgatagcatcatcagtggccaatttcacaccaagggccaggttgactctaaacgc
tgggaggtcggcattgacaactcagatctggagggcgaaattcagggctacccatttcac
ctcctcggggatatcaatatcgatgataaactgcacctcaaagccgatagtttaaagctc
agcgcgctgcagagtgtattgtccatatccggcaatgctgatgaggcttgggccgttaac
gcaaaattgcagatcccggatcttagcctctggcataccgagtcatcgggcagtatcgat
gcatttatcaatgtctcgggtgaaagcgagcacccacaagtttccgtttcagccgagtta
ttcgagctgcaatttcaacaacacaaaattgaacaagccctggccaaaggcttttatcga
cccaaagataatcaggagtttgccctctctgttaaggctaaggaactgaagctcgcaacc
gtcaagcttgattcggttaccctgggttttaaaggtaatgacacaaagcagaaactgggg
ctgcaaacgttcggtgagctacaactcaataccaaaatttactcccgatacgacacaaaa
acgactcaattagaggccgagatcagaaacttgagtttgaactctgtgctgggtaagtgg
gcgctccaggcacctatcgatgtcagctggaataatgacaagcaaacgggcttagttaac
actttttgctggctcaacgaaaacggtaaactttgcctcgatgatccggcagagctcagc
aaaaacggtgaggccagtatcctgttcgatggcgatataggtggagtattgacgccatta
ctgccggaaaatttgacgtggcaggcccccgctaacttaacctctaatatcaagtggcaa
gaagagtcgaaacccgaaggctacttagaactgaatttagccccgggtcaggtgagtttc
aacaataataaccgtgttatcgatgtcggctacaggatgcttaattttcaagctagcctg
gacaaagataagcttgccacccaacttaaatttgattcacacgatatcgccagttgggaa
ggacagttagaggtaagcgtctcccctgacagggcgatatccggttacactaagctagat
caaataaacctcgatgccctatcggagcttatgccacaactcgaaactctgaccggaaaa
atttccagtgagctggagatatccggcacactcgccaaaccggatatttccggaaaagtg
cagctggaaaatggtcacctgctggccgccgccaacccgactccattggagaatatcgaa
ctcgatctcttactctcgggccagaaagccacactcgatgggcggtggaaaatgggagag
ggcgaggcaaaagttactggtttgtttgattggagaggcgatagcttcaacggtgatatt
cagttcgatggtgataagcttgctattatccaaccaccgcttgccatcatcacggcctcc
cctgcacttaaaatcaaattcgataaagatagggccgacattcaaggctctatagatatc
gattcgggtaatattaagattagtcaactgccagaaggcggtgtcgccgtctccgatgat
gtggtatttgaagacagcatctccagcggacaagtcgaacaaagcccctatgccatcaca
accaacattaaaatcaaggttgcggatagacttagaatcgatggcatggggttaagagga
aagctaacggggacgctcgatctcagacaggaagcctttcgccctcctctgctgtacggc
gatataagagtcatcgacggtagctataaatttatggggcaaacccttaaaatcaatgcc
ggagaggtgcaatttatcggcccggtcgagatccctaaccttaatattgaggcggttaga
gagattaaagatgaagatgtcgttgccgggatcaggatcaccggcactccactcaaaccc
atagtgacgcttttttcatcaccagtgaaagagcaagccgagatcctctcctatatcatc
aaaggaaccgggtttcacagtaacgacggcgatcaaaatagtagcttgatgatgggggcg
gcattaacactcagtaatcaactcggcggtggcacggtaaatctgatcggcgaatccgcc
acaggtctcatcgaaaaagtgggcttctctaatgtacaactcgatgctaatgatgatggc
cgagtcgccatcagtggctacatcggtgaaaaccttatggttaaatacggtgtcggtgta
tttaacccgggctatgagatgaccgtaaggtattacctgttatctcaactctatctggaa
accgtgtctggcacggtcgaacagtccctggatatctactacaacttcaacatagactag
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