Shewanella sediminis: Ssed_2528
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Entry
Ssed_2528 CDS
T00596
Name
(GenBank) conserved hypothetical protein
KO
K14742
tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
Organism
sse
Shewanella sediminis
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sse03016
]
Ssed_2528
Transfer RNA biogenesis [BR:
sse03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
Ssed_2528
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TsaD
Motif
Other DBs
NCBI-ProteinID:
ABV37135
UniProt:
A8FWB2
LinkDB
All DBs
Position
complement(3071838..3072557)
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AA seq
239 aa
AA seq
DB search
MTDKQKNIEELTVLALDTCTESCSAALISGGKIYSEQVDAPREHSQRILPMVDSVLSQAN
IQLQNVDVIAYGRGPGSFTGIRICTSMTQGLALGQDLPVIGISSLQTMAQAVFDDQGGEQ
FIAAIDARMGEVYWGQFTVKDGLVALIDAELVCSPDDVPLTLDVSQPIVVCGTGFDTYPN
LLNLSENISLAENVKFPDAKAMLALAQAGFELGLSTAVDDLAPVYVRDTVTWKKLPGRE
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgactgataaacagaaaaacattgaagaattgaccgtgttagcgttagacacctgcacc
gaatcatgctctgcagccttgatttcaggtggtaagatctattctgagcaggtcgacgcg
cctcgtgaacatagccagagaattttacctatggtcgattcggtgctatctcaggcgaat
attcaacttcaaaatgttgatgtaatcgcatatgggcgtggcccgggaagttttaccggt
atcagaatttgtaccagcatgactcaaggcctggctttaggccaagatcttccggttatc
gggatctcctcattgcaaacgatggctcaggctgtgtttgatgaccagggcggagaacag
tttatcgctgccatcgatgccagaatgggtgaagtgtactggggacagtttacagtcaag
gatggtttggttgcgctcatcgatgccgagctggtctgttcacccgatgatgtgccactg
accttggatgtcagtcagcctattgtggtttgtggtaccggctttgatacttatcctaat
ctattgaacctgtcagagaatatttcactggctgaaaatgttaagtttcccgatgccaaa
gcgatgttggcactggcccaagccggttttgaacttgggttaagtacagccgttgacgac
ttggctcccgtgtatgtacgcgatactgtcacctggaagaagctacccgggcgagagtga
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integrated database retrieval system
