Shewanella sediminis: Ssed_2597
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Entry
Ssed_2597 CDS
T00596
Name
(GenBank) Phenylalanine--tRNA ligase
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
sse
Shewanella sediminis
Pathway
sse00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Ssed_2597
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sse01007
]
Ssed_2597
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sse03016
]
Ssed_2597
Enzymes [BR:
sse01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
Ssed_2597
Amino acid related enzymes [BR:
sse01007
]
Aminoacyl-tRNA synthetase
Class II (U)
Ssed_2597
Transfer RNA biogenesis [BR:
sse03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Ssed_2597
Prokaryotic type
Ssed_2597
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
B5
tRNA_bind
Motif
Other DBs
NCBI-ProteinID:
ABV37204
UniProt:
A8FWI1
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All DBs
Position
complement(3146468..3148855)
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AA seq
795 aa
AA seq
DB search
MKFSESWLREWVNPSISREELSHQITMAGLEVDGIEGVAGEFSGVIVGEVVECGQHPDAD
KLRVTKINVGEDELIDIVCGAPNCRLGIKVAVAMVGAVLPGDFKIKKAKLRGEPSFGMLC
SYGELGIDVESDGILELPVDAPIGADLRDYLSLNDAVIDVDLTANRADCLGMAGLAREVG
VLNRQSVTEPTWEAVSPTIDDAIKIDLQAPAFCARYLGRVVKNVNVKAESPLWMQEKLRR
SGIRSIDPIVDITNYVLIEFGQPMHAFDLAQLAGDIQVRMGSGDEKLTLLDGKEITVPAD
TLVISDQERPLALAGVFGGEYSGVNTDTQDIMLECAFFAPLAILGKARRLGLHTDSSHRF
ERGVDPELQHKVMDRATRLVLDICGGEAGPVVEAKSEEHLPKPVEIVLRRSKLDRILGHH
ISDAEVTEILERLGFDVTVNSDTWEVTTATYRFDMAIEEDLIEEVARIYGYNNIPNTAPV
ASLSMPDHKESDISLKRVRSMLVARGFQEAVTYSFVDPKLQNLVHPGEEAMILPNPISVE
MSAMRLSMFTGLLGAVGYNQSRQQNRVRLFETGLRFVPDTTAESSVRQQAMLGAVISGNQ
KDEHWSMESKTVDFFDLKGDLEAIIGLTVSDVEFTFRSATHPALHPGQCAEILRNDRVIG
IIGAVHPSLEKPFGLNGKTIVFELELDALLHAGLPLAQTVSKFPANRRDIAVVVDDNVSA
GDVVKMIRKVGQNQLVGLNLFDVYQGKGVEPGKKSLAIALTLQDNTRTLEEKEIAEMVDS
VVSALKSEFNALLRD
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttagtgaatcttggcttcgtgagtgggtaaacccaagcattagtcgtgaagag
ttatcccatcaaatcaccatggctggtttggaagtggatggtattgaaggtgttgccggt
gagttcagcggtgttatcgtgggtgaagttgtcgaatgtggtcaacacccggatgccgat
aagctacgagtaacaaagatcaatgtcggtgaagatgagttgatcgacatcgtttgtggc
gcacctaactgtcgtctgggtattaaagttgcagtggctatggtcggtgcagtactaccc
ggtgactttaagattaagaaagccaaactacgcggtgagccgtcgtttggtatgctttgc
tcatacggtgagctaggcatagacgttgaaagcgatggtattctcgagctaccagtcgat
gcgccaattggtgcagaccttcgtgattacttgagtcttaatgacgccgttatcgatgtt
gacttgacagctaaccgtgcagactgtctcggtatggcaggccttgcccgtgaagtgggt
gtattaaaccgtcagtctgtgactgagccaacttgggaagcggttagcccaacgattgat
gacgctatcaagatcgatcttcaggcgccggcattttgtgcacgttatttaggtcgtgtg
gttaaaaacgtcaacgtgaaagccgaatcgccactttggatgcaagagaagttgcgtcgc
agtggtatccgctcaatcgatcctattgtcgatattactaactacgtgttgatcgaattc
ggtcagcctatgcacgcgttcgatcttgctcaactggcaggtgacatacaagtacgcatg
ggaagtggtgatgagaagctaacactgcttgatggtaaagagatcactgttcctgctgac
actctagtcattagcgatcaagaaaggcctctggcgcttgctggtgtctttggtggcgaa
tactcaggtgtgaacaccgatactcaggacatcatgctcgagtgtgcgttcttcgcacct
ctagccatcttaggtaaggctcgtcgtcttggcctgcacacagactcttcacatcgcttc
gagcgtggtgttgaccctgagctgcagcataaggtgatggatcgcgctacacgtctggta
ctcgatatctgtggcggcgaagcgggtcctgttgtcgaggctaaatcagaagagcatctt
cctaagcctgttgagatcgttttgcgtcgtagcaagcttgaccgaatcctgggtcaccat
atctctgatgccgaagtgactgagatccttgagcgtcttggctttgatgtaacagtgaat
agcgatacctgggaagtgacgacggcaacgtatcgtttcgatatggctatcgaagaagac
ttgattgaagaagttgcccgtatctacggttacaacaatatccctaacacagcgcctgta
gcatccttaagcatgcctgatcataaagaatcagatatcagcttaaagcgtgttcgcagc
atgcttgttgcccgtggtttccaggaagcggtgacttatagtttcgtcgatcctaagttg
caaaacttagttcatccgggtgaagaggcgatgatattgccgaacccaatctctgttgag
atgtcagcgatgagactatcgatgtttaccggtcttttaggcgccgtgggttataaccag
agccgtcaacaaaatcgtgttcgtcttttcgagaccggcttacgctttgtacctgatact
actgcagaatcaagtgtacgtcagcaagcgatgttgggtgcggttatctcaggtaaccaa
aaagatgaacattggtcgatggagtctaaaacggtcgatttcttcgatcttaagggcgac
ctcgaagccatcatcggcttgacagtttccgatgttgaatttacttttagaagtgcaaca
catccagctcttcatccggggcaatgtgctgaaatattaaggaatgatcgagtcattggt
atcattggtgcggtacatccaagcttagaaaagccttttggactcaatggtaaaacaatt
gtttttgagctcgaattggacgctttattacatgccggcttaccgctagcccagactgta
tctaagtttcctgctaaccgtcgtgacatcgccgtcgtagtagatgacaatgtttctgcc
ggagatgttgtaaaaatgataagaaaagttggccaaaatcagttggttggcttaaactta
ttcgatgtataccaaggtaaaggtgttgagccaggtaaaaagagcctagccatcgcactt
acattacaagacaacacacgtacacttgaagaaaaagagatagctgagatggtagattca
gtggtttccgctctcaagtcagagttcaacgcactgttgagggattaa
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