Shewanella sediminis: Ssed_2647
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Entry
Ssed_2647 CDS
T00596
Name
(GenBank) DNA-directed DNA polymerase
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
sse
Shewanella sediminis
Pathway
sse03030
DNA replication
sse03430
Mismatch repair
sse03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Ssed_2647
03430 Mismatch repair
Ssed_2647
03440 Homologous recombination
Ssed_2647
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sse03032
]
Ssed_2647
03400 DNA repair and recombination proteins [BR:
sse03400
]
Ssed_2647
Enzymes [BR:
sse01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Ssed_2647
DNA replication proteins [BR:
sse03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Ssed_2647
DNA repair and recombination proteins [BR:
sse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Ssed_2647
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DUF2284
SecM
FlhD
Motif
Other DBs
NCBI-ProteinID:
ABV37254
UniProt:
A8FWN1
LinkDB
All DBs
Position
complement(3202148..3203062)
Genome browser
AA seq
304 aa
AA seq
DB search
MDLPWLTPVIGDFSEQLKSQHIGHAYLVGVHNGYGGEILSLALAKAALCQLVTSQGACGF
CKACQLVEANNHPDFYHIVADGNQIKVDQVRELCRKLTSTSQQGGRRVAVISNCEKLNQA
SANALLKTLEEPGNETLLLLQSDTPSRLMATISSRCQRIHFQAPTREEIKAWLSLVAGVK
SDVTWCLPVMGGPLELAKALEGDRYAALLQLRKDWSQSLSSGHLCANLININEKQVSDAL
KVLYLLLRQKLVKQTELDALLRVRITEFSAKVMATYHRLLLMPNVNYLALFQSFILEYNE
MGKK
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggatctgccttggttgacccctgttatcggagattttagtgagcaactaaaatcacag
catatcggtcatgcataccttgttggggtgcataacggatatggtggtgaaattctctct
ttagccttggcaaaagccgcactatgccaattggtgacatcgcagggagcatgcggattc
tgtaaagcgtgtcagttagtcgaggcgaataatcatccggacttttatcacattgtggcc
gacggaaatcaaattaaggtcgatcaggtgagggagctttgtcgaaagctgacgtcgacg
tcacagcaaggcggaaggcgcgttgccgttatcagtaattgtgaaaagttaaaccaggcc
tcggcgaatgccctgttaaaaacactcgaagagcccggtaacgagacattactgctgtta
cagtctgatacgccttcgcggttgatggctaccataagtagtcgctgtcaacggatccat
tttcaggcaccaacacgcgaagagatcaaggcttggctatcactggtagcgggtgttaaa
tccgatgtaacctggtgtctgccggtgatgggcggacccttggagttagctaaggcactg
gaaggcgaccgatatgccgccttgcttcagctaagaaaagactggtctcaaagtttgtcc
tctggtcacctgtgtgctaatttaattaatataaatgaaaagcaagtttctgatgcactt
aaagttttatacctacttttaaggcagaaattagtgaaacagacagaattagatgcattg
ttgagagtgagaataacagagttcagcgcgaaggtgatggcgacttaccatcgtctttta
cttatgccgaatgtaaattatttagccttatttcaatcatttatattagaatacaacgag
atgggcaaaaagtga
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