Shewanella sediminis: Ssed_2653
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Entry
Ssed_2653 CDS
T00596
Name
(GenBank) Methionine--tRNA ligase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
sse
Shewanella sediminis
Pathway
sse00450
Selenocompound metabolism
sse00970
Aminoacyl-tRNA biosynthesis
sse01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
Ssed_2653
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Ssed_2653
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sse01007
]
Ssed_2653
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sse03016
]
Ssed_2653
Enzymes [BR:
sse01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
Ssed_2653
Amino acid related enzymes [BR:
sse01007
]
Aminoacyl-tRNA synthetase
Class I (U)
Ssed_2653
Transfer RNA biogenesis [BR:
sse03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Ssed_2653
Prokaryotic type
Other AARSs
Ssed_2653
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
tRNA-synt_1
tRNA-synt_1e
Anticodon_3
tRNA-synt_1f
Anticodon_1
ADK_lid
Motif
Other DBs
NCBI-ProteinID:
ABV37260
UniProt:
A8FWN7
LinkDB
All DBs
Position
3207689..3209767
Genome browser
AA seq
692 aa
AA seq
DB search
MANSQRKILVTSALPYANGPIHLGHMLEYIQTDIWSRFQKLRGHECHYICADDAHGTPIM
LKAQQLGIEPEEMIAQVNKEHQQDFADFNIKFDNFHSTHSVENRELSGEIYLKLRDAGFI
KTRTISQLFDPEKSMFLPDRFVKGTCPKCKSEDQYGDNCDNCGATYNPTDLIDPKSAVSG
ATPVMKDSEHFFFDLPAFENMLSEWTRSGAIQDEIANKLAEWFEQGLQQWDISRDAPYFG
FEIPDAPGKYFYVWLDAPIGYMGSFKNLCDRREDLNFDDFWSKDSTAEVYHFIGKDIVNF
HSLFWPAMLEGAGYRKPTSVFAHGYVTVNGAKMSKSKGTFIKARTYLDNLDPEYLRYYYA
AKLSNRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFISKRFDGKLAKIADTTLEETF
LAKQEVIADLYENREFGKAMREIMALADIANAYVADAAPWQLIKDEAKQDEAHQVCSNAL
NLFRILVTYLKPVLPKLADDVEAFLQFPLTWDNLGADLAGHEIAKFKALMQRIDMKNIEA
IIEASKDNLQATTEAAPEKKAKKSAETADVAVDTRSPLESDPISDEISFDDFAKLDLRIA
RIAKAEHVPEANKLLKLQLDLGGETKQVFAGIKSAYAPEDLEGKLTVMVANLAPRKMRFG
MSEGMVLAAGPGNKDLWILEPHEGAQPGMRVK
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggcaaattcacaacgtaaaatcctggtgacaagcgcacttccatacgccaatggacct
atccatttaggccatatgctggaatatattcaaaccgatatttggtcacgattccaaaaa
cttcgtggacatgaatgtcactatatctgtgccgatgatgcccatggtacgcctatcatg
cttaaggctcagcagctgggtattgagccggaagagatgatagctcaggtcaataaagag
catcagcaggattttgctgacttcaatatcaaatttgacaatttccacagcactcacagt
gttgaaaaccgcgaactttcgggtgaaatctacctcaagttacgtgatgccggttttatc
aagactcgcactatctcgcagttatttgatccagaaaagtcgatgtttcttccggaccgc
ttcgttaaaggcacctgccctaagtgtaagagtgaagatcagtacggcgataactgtgat
aactgtggcgccacatacaatcctacagatctgattgatcctaaatcggccgtatctggt
gcaactcctgtgatgaaggactctgagcatttcttcttcgacctgcctgcatttgaaaac
atgcttagcgagtggactcgctctggcgcaattcaagatgagatcgcaaataagctagct
gaatggttcgaacagggcctgcagcagtgggacatcagccgtgatgccccttacttcggc
ttcgagatccctgatgcgccgggtaagtacttttacgtatggctcgatgcccctatcggt
tacatgggttcgtttaaaaacctgtgtgacagacgtgaagatcttaacttcgacgacttc
tggtctaaagactctactgccgaggtgtatcacttcatcggtaaagatatcgttaacttc
cacagtttattctggccagccatgctcgaaggtgcgggttaccgtaaacccaccagtgta
ttcgctcacggctatgtcacggttaacggcgctaagatgtcaaagtctaaaggcaccttt
atcaaggcccgtacttaccttgataacttagatcctgaatacctgcgttattactatgcg
gctaagctcagcaatcgtattgacgatctcgaccttaacctggaagattttgcccagcgt
gttaactcagatctggttggtaagttagttaacctggcttcacgcaccgcgggctttatc
agcaagcgtttcgatggcaagttggctaaaatcgccgacaccacacttgaagagactttc
ctggcgaagcaggaggtcattgcagatctctacgagaaccgtgaattcggtaaggcgatg
cgtgagatcatggcactggctgatatcgccaacgcttatgttgccgacgctgcaccatgg
cagttaattaaagatgaggctaagcaagatgaggcacatcaggtgtgcagtaatgcacta
aacctgttccgcatcttagtgacttatctcaagccggtactgccaaaacttgcagacgat
gtcgaagccttccttcagttcccgcttacctgggacaatttaggcgccgatctcgccggt
catgaaattgctaagttcaaagccttgatgcaacgcatcgatatgaaaaatatcgaagct
atcatcgaagcgtcgaaggacaacttgcaagcaaccaccgaggctgcaccagagaagaaa
gctaagaaatcggctgaaacagctgatgtcgcagtagatacccgcagtccgctggaaagc
gaccctatctcagatgagataagcttcgatgatttcgccaaactcgacttgcgtattgca
cgtatcgctaaggccgaacatgtaccggaagccaataagctactgaaacttcagttagac
ttaggcggtgagaccaagcaggtctttgccggtatcaagtcagcttatgcgccggaagat
ctggaaggcaagctcaccgtgatggtggccaaccttgcgccgcgtaagatgcgcttcggt
atgtctgaaggcatggtgcttgctgcgggtcccggtaacaaagatctgtggatactggag
cctcacgaaggtgcccaaccgggtatgcgagttaagtaa
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