Shewanella sediminis: Ssed_2675
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Entry
Ssed_2675 CDS
T00596
Name
(GenBank) lytic murein transglycosylase
KO
K08305
peptidoglycan lytic transglycosylase B [EC:
4.2.2.29
]
Organism
sse
Shewanella sediminis
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sse01011
]
Ssed_2675
Enzymes [BR:
sse01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Ssed_2675
Peptidoglycan biosynthesis and degradation proteins [BR:
sse01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Ssed_2675
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Gene cluster
GFIT
Motif
Pfam:
SLT_2
PG_binding_1
Glucosaminidase
DUF915
Motif
Other DBs
NCBI-ProteinID:
ABV37282
UniProt:
A8FWQ9
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All DBs
Position
complement(3232271..3233404)
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AA seq
377 aa
AA seq
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MPASADDFASCVIKLKETAQAQGLSRDTIDNTLAKVKYISRVIELDKKQPEFSQTFDNYF
SKRVTDWRVKEGRKLLKENRELLNELSQKYGVPPQYLMAFWGLETNFGSYKGKMPVLDSL
ATLACDPRRSKYFTGELMKALKLKEEYQFESSQMVGSWAGAMGHTQFMPSAYAKYAVDGD
GDGKADLWNSTTDALTSAANFLNQLGWQRNERWGREVKLPKDFSYGYLGKDKAQPLAEWA
KLGVTKSDKTSLSTPDMNAALYLPAGHTGPAFLGYKNFDVIMRWNRSVYYAIAVGHLADR
INGGVSLAVKPPKQDNLSRARVKSLQAKLNEKGFDVGKPDGVMGRNSKTGLRAFQLSVGL
VADGFPSEATFKALGVI
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgccggccagcgccgatgactttgcctcttgtgttattaaacttaaagagaccgcgcaa
gcgcaagggctatcgagagacaccatagacaacaccttggcaaaggtaaaatatatctct
cgagttatcgagttagataagaaacagccggagtttagccaaacgttcgataactatttc
agcaaaagggtgaccgactggcgcgtgaaggaggggagaaagttactaaaagagaaccga
gaactcctcaatgaattatcacagaaatacggagtaccgccacaatatctgatggcgttt
tgggggctggaaactaacttcggctcttataaagggaaaatgccggtactcgactcttta
gctacactggcctgtgatcctcgccgtagtaaatatttcaccggcgaattgatgaaagcc
ttgaagcttaaagaggagtatcagtttgagtcctcacagatggttggctcatgggccggt
gctatgggccacacacaatttatgcctagtgcttatgcaaaatatgccgtcgatggagat
ggcgatggtaaagccgacctttggaacagcaccacagacgcattgacctcagcggcaaac
tttttaaatcaactcggctggcaacgtaatgaacgttggggccgtgaagtcaaactgcca
aaggatttcagttatggatacctgggtaaggacaaggctcaacctctggccgagtgggca
aagcttggggtgactaagagtgataagacctctttgtctacaccggatatgaacgccgca
ctctatctgccagcggggcataccggtccggcatttcttggctacaagaactttgatgtg
atcatgcgatggaatcgttctgtgtattacgccattgcggttgggcatctggctgacaga
atcaatgggggggtaagtttggccgttaagccacccaagcaggacaacttaagtcgagcg
cgtgtcaagtcgttgcaggctaagttaaatgagaaagggttcgatgtaggaaagcctgac
ggcgtgatgggcaggaactccaaaaccggattaagagcgtttcaactgagcgttgggctg
gttgcagatggttttccaagtgaagctacctttaaggctttaggcgttatttaa
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