Shewanella sediminis: Ssed_2816
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Entry
Ssed_2816 CDS
T00596
Name
(GenBank) Succinate dehydrogenase
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
sse
Shewanella sediminis
Pathway
sse00020
Citrate cycle (TCA cycle)
sse00190
Oxidative phosphorylation
sse00650
Butanoate metabolism
sse00720
Other carbon fixation pathways
sse01100
Metabolic pathways
sse01110
Biosynthesis of secondary metabolites
sse01120
Microbial metabolism in diverse environments
sse01200
Carbon metabolism
Module
sse_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sse_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sse_M00149
Succinate dehydrogenase, prokaryotes
sse_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Ssed_2816
00650 Butanoate metabolism
Ssed_2816
09102 Energy metabolism
00190 Oxidative phosphorylation
Ssed_2816
00720 Other carbon fixation pathways
Ssed_2816
Enzymes [BR:
sse01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
Ssed_2816
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
DAO
GIDA
Pyr_redox_2
FAD_binding_3
FAD_oxidored
Thi4
Motif
Other DBs
NCBI-ProteinID:
ABV37423
UniProt:
A8FX50
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All DBs
Position
complement(3399721..3401487)
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AA seq
588 aa
AA seq
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MSIPVREFDAIVIGAGGAGMRAALQISKEGKSCALLSKVFPTRSHTVSAQGGITVALGNA
HEDHWEQHMYDTVKGSDFIGDQEAIEFMCKTGPEAVIELEQMGLPFSRFENGKIYQRPFG
GQSKNFGGEQAARTAAAADRTGHALLHCLYQQNVKHKTEVYSEWYALDLVKNEDGAIVGC
TAIDIESGEIVYFKAKATVLATGGAGRIFASTTNAHINTGDGVGMAMRAGVQMQDMEMWQ
FHPTGIAGSGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLASRDVVARSMMTEIREG
RGLDGPLGPHCLLKLDHLGKETLEARLPGVCELSRTFAHIDPADGPIPVLPTCHYMMGGL
PAKVSGQVIRKNTDGSESDVTGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGQHLG
KALDETATPIDATEADIAKSLERLNRWEGNKDGEDPVQIRKDLQLCMQLNFSVFRRGDAM
AEGLKELKAIRKRLDNAKLSDNSTEFNTQRIECLELDNLMSTAIATAYAANYRTESRGAH
SREDYLDRDDENWLCHSLFDPATEEMDRRPVNMEPKLRDAFPPIKRTY
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
gtgagtattccagttcgcgaatttgatgcaattgttatcggcgccggtggcgcgggtatg
cgagccgcattacagatttctaaagaaggtaagagctgtgcgctgttatctaaagtattc
ccgacacgttctcatacggtatctgcgcagggcggtatcaccgttgcgttaggtaacgcc
catgaagatcattgggaacaacatatgtacgatacggttaaaggttccgattttatcggt
gatcaagaagccattgagtttatgtgtaaaaccggcccggaagcggttatcgaactcgaa
cagatggggctacctttctctcgattcgaaaatggtaaaatttaccaacgacctttcggc
ggtcaatctaaaaactttggtggtgaacaggctgcacgtaccgcagcagcggctgaccgt
acgggtcatgcgcttctacactgtctttaccagcaaaatgttaagcacaaaactgaagtc
tattcagagtggtacgcactggacttagtgaaaaacgaagatggcgcaatcgtcggttgt
actgcaatcgatatcgaaagcggtgaaattgtttactttaaagctaaggcgacggtactt
gctaccggtggtgcagggcgtatcttcgcgtctactaccaatgctcatattaataccggt
gatggtgttggcatggcgatgcgcgctggcgtgcagatgcaagacatggagatgtggcag
ttccacccaaccggtattgccggctcgggtgtacttgtgactgaaggttgtcgtggtgaa
ggcggatacctgctgaacaaagacggcgagcgtttcatggagcgttatgcacctaatgcg
aaagatttagcatctcgtgacgtggttgcacgttcgatgatgactgagatccgcgaaggt
cgtggtctcgatggcccattaggcccacactgtctgcttaaactcgatcatctgggtaaa
gaaacgctcgaagcgcgtcttccgggtgtgtgtgaactttctcgtaccttcgcccatatc
gatcctgccgatggtccaattccagtacttccgacttgtcactatatgatgggtggccta
ccggctaaagttagcggtcaggtgatacgtaagaatacagatggcagcgagagtgacgtt
actggtctattcgccgtcggtgagattgcctgtgtatctgtacacggcgctaaccgatta
ggtggtaactcactgcttgatttagtggtctttggacgcgctgcgggtcaacacttaggt
aaagccctggatgagactgcaacaccgattgatgcgacagaggctgatattgctaaatcc
cttgagcgtctcaatcgttgggaaggcaataaagacggcgaagatcctgttcaaatccgt
aaagacctgcagctttgtatgcagcttaacttctcagtattccgtcggggcgacgcgatg
gctgaaggcttgaaagagcttaaagcaatccgtaagcgtttggacaatgcgaagctgtct
gataactcaaccgagttcaatactcagcgtattgagtgtttagagttagacaacctgatg
tcaacggcgatagcgacggcctatgcggcaaactatcgtaccgagagtcgtggtgcgcac
tcacgtgaagattatctggaccgtgatgatgagaactggttgtgtcatagcctgtttgac
cctgcaaccgaagagatggatcgacgacctgtaaacatggagcctaagcttcgtgatgca
ttcccgccgattaagcgtacttactaa
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