Shewanella sediminis: Ssed_2859
Help
Entry
Ssed_2859 CDS
T00596
Name
(GenBank) dihydrouridine synthase, DuS
KO
K05541
tRNA-dihydrouridine synthase C [EC:1.-.-.-]
Organism
sse
Shewanella sediminis
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sse03016
]
Ssed_2859
Transfer RNA biogenesis [BR:
sse03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
Ssed_2859
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dus
His_biosynth
NMO
MR_MLE_C
TMP-TENI
Motif
Other DBs
NCBI-ProteinID:
ABV37466
UniProt:
A8FX93
LinkDB
All DBs
Position
3458650..3459576
Genome browser
AA seq
308 aa
AA seq
DB search
MRVILAPMEGVADAPMRSLLTSVGGYDMVISEFIRVVDQLLPEKVFYRLCAELANNSQTQ
AGTPVRLQLLGQHPSWMAENALRAVELGSRGVDLNFGCPAPMVNRSNGGAALLKEPDTIY
RVTHSVREAVPSNHPVSAKIRLGWDDKSRCVEIAQAIEAAGATELTVHARTKEEGYRPPA
HWEYINQIKEAISIPVIANGEVWNREDYQRCQVVSGCNDVMVGRGALAVPNLAHVLKGTQ
DAMPWDEVKQLLLQYSEYEIVSAKEKYYPARIKQWLRFIVLQYEEADLLFRQVRVMKQTA
DILVALKA
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtaatacttgctccgatggaaggggttgccgatgcaccgatgcgttcgctactc
actagtgttggtggatacgatatggtcatcagtgaatttattcgcgtcgtagatcagcta
ctgcctgaaaaggttttttatcgattatgcgccgaactagccaataacagtcaaacccaa
gcgggaacccctgtacgactgcaactattagggcaacaccccagctggatggccgaaaat
gcccttagggcagtagagctgggctctcgtggtgtcgatctaaattttggctgcccggcc
ccaatggtcaatcgcagtaatggtggtgcagcgctgctaaaagagcctgatactatctac
cgtgtaactcattcagtgagagaggctgtccccagtaatcaccccgtatcagccaaaata
agattaggctgggatgataagagtcgatgtgtcgaaattgcacaggcaattgaagccgcc
ggagccactgaactgacggtacatgcccgcactaaagaggaaggctatagaccccccgct
cactgggaatatataaatcagatcaaagaggctatctctatccctgttattgccaacggc
gaagtctggaaccgagaggattaccaaaggtgtcaagttgtcagtggctgcaatgatgtc
atggtgggtcgcggagcattagccgttcccaaccttgctcatgtcttaaaaggaacacaa
gatgccatgccatgggatgaagttaagcaactgctgcttcaatattctgaatatgagatc
gtcagtgctaaagagaaatactacccggcacgaatcaaacagtggcttaggtttattgtc
ctccagtatgaagaagccgacctcctgttcagacaggttagagtcatgaaacaaacggcc
gacattttagtggcattaaaagcctaa
DBGET
integrated database retrieval system
