Shewanella sediminis: Ssed_2882
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Entry
Ssed_2882 CDS
T00596
Name
(GenBank) signal transduction histidine kinase, LytS
KO
K27882
two-component system, LytTR family, low-concentration pyruvate sensor kinase [EC:
2.7.13.3
]
Organism
sse
Shewanella sediminis
Pathway
sse02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Ssed_2882
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sse01001
]
Ssed_2882
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sse02022
]
Ssed_2882
Enzymes [BR:
sse01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
Ssed_2882
Protein kinases [BR:
sse01001
]
Histidine kinases
LytTR family [OT]
Ssed_2882
Two-component system [BR:
sse02022
]
LytTR family
BtsS-BtsR (pyruvate reutilization)
Ssed_2882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
5TM-5TMR_LYT
His_kinase
SpoVT_C
GAF_3
HATPase_c
ECF_trnsprt
GAF_2
GAF
ECF-ribofla_trS
C19orf12
Motif
Other DBs
NCBI-ProteinID:
ABV37489
UniProt:
A8FXB6
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All DBs
Position
3485795..3487471
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AA seq
558 aa
AA seq
DB search
MSLILLLTQQMSLYLVLVYLVSKTPLFKFFAEAATRLPHKIFIYLIFSGFCIMATYFGEQ
TNDAIANTRAMGAVLGGLLGGPVTGFLVGLTGGLHRYSMGGFTDVACAISTTLEGFSAGM
ISLYLRRQDKSELIYAPLLVCLVTFCAEMLQMGVILLVAQPFSDAWALVKQIALPMLLVN
SIGAALFMSMVRDQKTMFDKLSSAFSTQALKIAERSVGVLSKGFNQESSTQVAQIIIEET
HVGAVAITDREHLLAFIGTGADHHIPGTPISSKITQDAIDNNCVMFADGVNMAYSCSISP
QCRLGSSLVIPLRCENEVIGTIKLYEPKNKLFLNINRTLGEGIGRLLSNQILFGRFERQQ
NLLTQAELKLLQAQVNPHFLFNALNTIAAIIKRDPLKARQLIQQLSQFLRINLKRTTGLV
TLSDELEHIDSYLTIEKARFIDKLNVEIDIPDLLLTFRLPAFTLQPIIENAVKHGTSHML
EQGLIRVTGKVRDDLLILEVIDNAGLYQSDNNSEGLGMNLVHKRIQNQFGSEFGIDVDCR
KDEYTRVSIKLPYTETQS
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgattttacttttaacccaacagatgagcctctacttagtgctggtctacctt
gtcagtaagacccccttgttcaaattttttgcagaagccgcgactcgcctgcctcataag
atattcatctacctgatcttttctggcttttgcatcatggcaacctacttcggtgaacaa
actaacgatgccatcgccaacacccgtgccatgggggccgttttaggcggtctgttaggc
gggcccgttaccggctttctggtcggtctcacaggaggcttacacagatatagcatggga
ggcttcaccgatgttgcctgtgctatttctactactctcgaagggttttcggcgggaatg
atcagcctctatttacgaagacaagataagagtgagctgatatacgcccctttgttggtc
tgcctggtgaccttctgtgcagagatgcttcagatgggggttattctactcgtcgcccag
cctttttccgatgcatgggcgttggttaaacagatagcccttccgatgctcttagtgaac
tctatcggtgcagccctgtttatgagtatggtaagagatcaaaaaaccatgttcgacaaa
ctctcatccgcattctcaactcaagcattaaaaattgccgaacgcagcgttggggtgtta
tcgaaggggttcaatcaagaaagtagtacccaggttgcccagattattatcgaagaaacc
catgttggagccgttgcgataaccgatagagagcatctgttggcctttatcggaacaggc
gccgaccatcatattccaggcactccgatatcatcgaaaataactcaagatgccatagat
aataactgtgtcatgtttgccgacggagtcaacatggcatactcctgctccatctcccca
caatgtcgactaggctccagcttagtgatcccgcttcgatgtgaaaatgaggtaattgga
acaattaaactttacgagccaaagaacaagctatttcttaacataaaccgaacgctgggt
gagggaattggtcgattattatcgaaccagatcttattcggtcgcttcgaacgtcaacaa
aatctactcactcaggctgagttaaagttattgcaggcacaagttaaccctcatttcctc
ttcaatgcgctcaataccatcgcagccatcataaaaagagatcccttaaaggcaagacaa
ctgatccaacaattatctcaatttttaagaattaacctcaaacgcaccacaggactcgtg
acactttcggatgaacttgaacatattgattcatatctgaccatcgagaaagcacgtttt
atcgataaactaaacgttgagattgatatccctgatctactgcttacctttcgcctgccc
gcatttaccttgcagcccatcattgaaaacgcagtgaagcatggtaccagccatatgtta
gagcaaggtcttataagagttactggcaaggtacgcgatgatttattaatattagaggta
attgataatgcagggctataccagtcagataacaattcggagggtctggggatgaatttg
gttcataaacgaattcaaaatcagtttggatctgaatttggtatcgatgtcgattgccgc
aaagatgaatacaccagagtcagcattaagctaccatatacggaaacccagtcgtga
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