Shewanella sediminis: Ssed_2905
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Entry
Ssed_2905 CDS
T00596
Name
(GenBank) ABC transporter-related protein
KO
K18893
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
sse
Shewanella sediminis
Pathway
sse02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Ssed_2905
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sse02000
]
Ssed_2905
Transporters [BR:
sse02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Ssed_2905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
RsgA_GTPase
MMR_HSR1
AAA_22
AAA_29
Septin
AAA_16
Zeta_toxin
AAA_15
AAA_24
DUF815
Motif
Other DBs
NCBI-ProteinID:
ABV37512
UniProt:
A8FXD9
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Position
3509445..3511274
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AA seq
609 aa
AA seq
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MFKRFESWVNALPYEEPVQPPKGIYAFCRHYTRGFELPLILMSILTATLAILEVSLFGFM
GQLVDMLIANDPQTLFEKEGQKLIGMTVLVLVIIPTLVLLHALIVYQGLLGNYPMSIRWL
AHRYLLKQSVSFYQNDFAGRIATKVMQTSLAVRETVTKLLDVLVYILVYFTSMVVMIANA
DLRLMVPMLIWLGLYISLQFMFLPKLKKVSTEQADARSTMTGRIVDSYTNITTVKLFSHT
QKEAEYARGSMKVFLNTVYRQMRLVTGINVSVQIINYLLAFTIAAVSIWLWTSSAITVGA
IAIAISLSLRLNGMSQWIMWEISSLFENIGTVTDGMNTLSKPTEIEDCIDAKPITVTQGC
IDFADVSFHYGESSGIIDNLNLNIKAGEKVGLVGRSGAGKSTLVNLLMRFYDVEQGSIQI
DKQDIKNVQQDSLRAHIGMVTQDTSLLHRSVRENILYGNPDASEDELLKAIKHAQAYEFI
QTLSDPEGNRGLDAQVGERGVKLSGGQRQRIAIARVLLKNAPILLLDEATSALDSEVEAA
IQESLYQLMEGKTVIAIAHRLSTIAAMDRLIVIDEGKIVEQGSHHELIQSGGIYAQLWAH
QTGGFLGVD
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaacgatttgaatcttgggtcaatgccctgccctatgaagaaccggtacaacct
ccgaaagggatatatgcattttgtcggcattacacccgaggatttgaacttcctcttatc
ctcatgtcgattttaaccgcgactttagccattttagaggtatcactatttggtttcatg
ggacagttggtcgatatgctcatcgctaacgaccctcaaaccttatttgagaaagaaggt
cagaagctaattggaatgactgttttggtattagtcatcatccccactctggttcttctg
catgccttaattgtatatcaaggactgcttggcaattatcctatgtcaatccgctggtta
gcgcataggtatctgctcaaacagagtgtctctttctaccagaatgattttgcaggaaga
attgcgaccaaggtcatgcagacatcactggcagtcagggaaaccgtgacaaagctatta
gatgtactggtatatattttggtttatttcacttcgatggtcgtcatgattgcgaatgcg
gatctaagactaatggtccctatgctgatctggctggggttatacataagcctgcaattc
atgtttttacctaagctaaagaaggtctctactgagcaagccgacgcccgctcaaccatg
accgggcggattgtagacagctataccaatatcacaacggtaaagctgttttcccacaca
caaaaagaagctgaatatgctcgaggcagcatgaaagtgtttctcaatactgtttatcgg
caaatgcgactggttacaggcatcaatgtcagcgtgcagataatcaattaccttctcgca
tttactatagctgcggtttctatttggttatggacgagcagcgcaattaccgtaggcgct
atcgccatcgcaatcagcctgtcgcttcgtctaaatggtatgtcgcaatggatcatgtgg
gaaatcagctcattgtttgaaaacatcggcaccgtgaccgatggtatgaacaccttatct
aaacccactgaaattgaagattgtatcgatgcaaagccaatcacggttacccaaggatgt
atcgattttgccgatgtaagttttcattacggcgaaagcagcgggatcatagataatctc
aacctgaatatcaaagccggcgaaaaagttggtctggtcggtcgctccggagcaggaaag
tcgacgctggtgaacttgttaatgcgcttctatgatgtcgaacaaggttcgattcaaata
gacaagcaagatattaaaaacgtacaacaagactccttgcgcgcgcatataggcatggtg
acacaagacacctctcttcttcaccgctccgttcgtgaaaatattctttacggcaatcct
gatgcaagtgaagatgagttactcaaagcgataaaacatgctcaagcctatgagtttatt
caaactcttagtgacccggaaggtaatcgaggtttggatgcacaagttggagaacgcggc
gtcaagctatccggcggtcaacgtcaacgtatcgccatcgcccgtgtcttgctgaaaaat
gcccctattctcctgctcgatgaggccacatcagccctggattcagaagttgaagcggcc
attcaagagagtttgtatcaactaatggaaggtaagactgtgattgctattgcccaccgc
ttatcgacaattgcagcaatggacaggcttattgtcatcgatgaggggaaaattgtcgaa
cagggctctcatcatgagttaattcaatccggtggtatctatgctcaactatgggcgcat
caaactggaggttttttgggggtcgattaa
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