Shewanella sediminis: Ssed_2911
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Entry
Ssed_2911 CDS
T00596
Name
(GenBank) ATP-binding region, ATPase domain protein
KO
K10125
two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:
2.7.13.3
]
Organism
sse
Shewanella sediminis
Pathway
sse02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Ssed_2911
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sse01001
]
Ssed_2911
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sse02022
]
Ssed_2911
Enzymes [BR:
sse01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
Ssed_2911
Protein kinases [BR:
sse01001
]
Histidine kinases
NtrC family
Ssed_2911
Two-component system [BR:
sse02022
]
NtrC family
DctB-DctD (C4-dicarboxylate transport)
Ssed_2911
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HisKA
HATPase_c_5
OmpH
TEX13
bPH_10
Motif
Other DBs
NCBI-ProteinID:
ABV37518
UniProt:
A8FXE5
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All DBs
Position
3520824..3522665
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AA seq
613 aa
AA seq
DB search
MAFTIKTKKYLLISIILLTGLAVILKATHWLYLNKGYAQTAQKSKQQMTELVNFLDGSLS
RYESIPHVLSTNPLLKNALLDQENPGSIQTLNLYLEEIQHITESLDIYLIDASGVAISAS
NWQKSYSFIGKDFSFRPYYQEAISGRLGRYYAVGTSSNKRGFYFSYPIYNQSIIVGAIVV
KVDITEIEQQSTGIARAGGYEFAITDPDNIIFLSSINSWRLNSLSPIGKERQYAINESKR
YANRVINELAIKPSYDENASAAQRIYAINSNKGVFDYMEIHQSMVKAGWNIHIMAPLSPT
YSALPAFMMLYATVYLLLALGALFAFEKRKSSLRIQQANDQLEQRVQARTQALQASNQKL
NETQDELIQAAKLTVIGSLSASINHEINQPLAAIRSYAQNTQTLVSRNQLEQVSDNINTI
ISLTDRLAAIVGQFKSFTRKSQGEDSATNINQCIQDSLTIIQPEIDKQGIELILSSNEIK
CEVWGDNIRLQQVLVNLMSNAIVAMKHCIHKKLIVTAEQGTMLRIRIQDSGPGVRESQME
KIFEPYYTTSERQGLGLGLSISRRIVESMQGNITVSNAHLSGAIFEITLPIYLHGTSHKS
ANAQQGEFSDEPQ
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggcatttacaataaaaacaaaaaaatatcttctcatctctatcattttactcactggt
cttgccgttatattgaaggcgactcattggttatatcttaataagggatacgctcaaacg
gcgcaaaaatctaagcagcagatgactgagctcgtcaactttctcgacggttctctgtct
cgatatgagagcattccacatgtattatccaccaatccattattaaaaaatgcactttta
gatcaagaaaatccaggtagcattcaaacgcttaacctctatttagaagagatccaacat
atcaccgaatctctggacatctatctaattgatgcttctggcgttgcgatatcggccagt
aactggcagaaaagttactcttttattggcaaagacttctcctttcgtccttattatcaa
gaagctatttcagggaggctcggtcgttactatgcagtgggtacctcatctaataagcgt
ggcttttacttttcataccctatctataatcaatcgattattgtaggcgcaatcgttgtc
aaagtggatataactgaaattgaacagcagagcacaggcattgccagagccggtggttat
gagtttgccattactgaccccgataacattatttttctctcaagcatcaatagctggcgg
ttaaattcattatcgcccatagggaaagagcggcaatatgcgataaatgaatcaaaacga
tacgctaacagagtcattaatgaattagcgattaagccctcttacgatgaaaacgcctcg
gcagcgcaaaggatatacgccataaactccaacaaaggggtatttgactatatggagatc
catcagtcgatggtaaaggccggatggaatatccatattatggcgccgctctcccccact
tatagcgccttacctgcttttatgatgctatatgccactgtgtatctattattggcatta
ggggctttattcgccttcgagaagcgtaagagttcattacgaatacagcaggccaatgac
cagctcgaacaacgtgtacaggccagaacacaagccctacaagccagtaatcaaaagcta
aacgagacacaagacgagttaatacaggcggctaagctcaccgtcataggcagtttgtct
gcgagcataaaccacgagataaatcagcctctggccgcaataagaagctatgcacaaaat
actcagacattggtaagcagaaaccaactagagcaggtttccgacaatataaataccatt
atttcactgacagacaggctcgccgccatcgtcggccaatttaaaagtttcacccgcaaa
agtcagggagaggacagcgcaactaacatcaatcaatgtattcaagattcgctcaccatt
attcaaccagagattgataagcaaggcattgaacttattctctcatcgaatgaaatcaaa
tgtgaggtctggggagacaatatcaggctacaacaagtactcgttaacctaatgagcaat
gccatcgtcgcaatgaagcattgcattcataaaaaactaatcgtgactgcagagcaaggc
acaatgctgcgtattcgcattcaagacagcggcccgggcgtacgagagagtcagatggaa
aagatattcgaaccttactataccaccagcgaacgccaaggtttaggtctgggtctatcc
atttcaaggcgcattgtcgaatcgatgcaaggcaatatcacggtttccaatgctcacctt
agtggtgccatatttgaaatcaccttacccatttatcttcatgggacatcacacaaatca
gctaacgctcagcagggagagttttccgatgaacctcaataa
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