Shewanella sediminis: Ssed_3032
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Entry
Ssed_3032 CDS
T00596
Name
(GenBank) polysaccharide export protein
KO
K01991
polysaccharide biosynthesis/export protein
Organism
sse
Shewanella sediminis
Pathway
sse02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Ssed_3032
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sse02000
]
Ssed_3032
Transporters [BR:
sse02000
]
Other transporters
Pores ion channels [TC:
1
]
Ssed_3032
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLBB
SLBB_2
Poly_export
Caps_syn_GfcC_C
Motif
Other DBs
NCBI-ProteinID:
ABV37636
UniProt:
A8FXR3
LinkDB
All DBs
Position
complement(3663288..3666056)
Genome browser
AA seq
922 aa
AA seq
DB search
MLLKVKKLIIVSIGVICLASGAVQAVTPSPQMIEQFKTLPKAEQERLAKQYGLDPSMLNA
DSTTTQEGFENQSIINPREVEDEKAKELKEQQIIVDEVTQFLKDQKDKDTKKLQPYGYDL
FEGEPMTFAPVSDIPVPGEYLVGPGDNIKVQLYGKENKEYDLVISRDGNIQFPELGPISV
SGLKFEDLRKTVSARIKQQMIGVETNITMGELRSIRIFIAGDAYKPGSYTVSSLSTITQA
LFVAGGIAEIGSLRNIQLKRKGKLLGTLDLYDLLMRGDASNDMRLRSGDVVFIPSVGGLV
SVDGEVRRPAIYELKGKESMGEVIAMAGGLKGAAYPRSSSIERYNKQGLKTIKNVDLTAD
KGRAVIAKAGDIVKVKTATTQFEDAITVLGAVIRPGKYQWYQGQRVSDLLPSIWGDFQPS
ADLDYAIIIREINKHGDIEVHQFAPSQAIITKAATEDLELSPRDIVMVFNFSDDAQNRFE
LNKLVRERVEKVVQLVGDSSLSKDLFKAGFSQLENQKLRNRSQLGGVVVAKEQVEDDEAL
AIKGEVNRMMANLFEDPELIKLSGLMNRSELLYPIIMKLNHQSRSGDGVQVVAIKGQVYH
EGMYPLAVNARISEAVKAAGGLKEGAYTSRAELTRTVTVADGSNITHQNIELLAALNGEP
SSNLTLKGRDILTIMTTPEWQENKSVEIRGEVRFPGVYNIRRGETLKEVVERAGGFTNFA
YLPSSVFVRESVRLQEQLEIKKLADQLRRDIATRGVSKDGDVVNYADAQLMLTDLENIEA
VGRLVVDLSAISIGIEQADLQLEDSDVLYVPSTKQTIAVMGEVQHAATHRYKQGLTLDQY
LNMSGGVRERADDGRTYVVKANGSVMLPSRSMWFSSEDRLQPGDTIIVPLDTEYKDNLTL
WTQVTSIIYNTAVAFASISNIK
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
gtgttactaaaagtaaaaaaactcattatagtaagcataggtgttatatgtttagcaagt
ggggcggttcaggctgttaccccttcaccgcaaatgatcgagcaattcaagaccttacct
aaggcagagcaagaaaggcttgccaagcaatatgggctcgatccatcaatgctaaatgct
gactctaccactactcaagaagggtttgaaaatcagtcaattatcaacccaagagaagtg
gaagatgaaaaagcgaaggagttgaaagagcagcagatcatcgtagatgaagtcactcag
ttcttaaaagatcaaaaagataaagatacaaaaaaattacagccatacggttatgacctg
tttgaaggtgaaccaatgactttcgcacctgtatcggatattccggtaccgggtgagtac
ctggttggccctggtgataacatcaaggttcagctttatggtaaagagaataaagagtat
gacttagtcatcagtcgtgacggtaacattcagtttcctgaactgggtccaatctcagtc
tctggtttgaagtttgaagatctgcgtaagacggtttcggcacgtattaagcagcagatg
atcggggtagagaccaatatcaccatgggtgaactacgctctattcgcatctttatcgcc
ggtgatgcctataaaccaggttcatataccgtatccagtctctctacaattactcaggca
ctatttgttgccggtggtattgctgaaattggctcgttaagaaacatccaactcaagcgt
aaaggtaagcttttaggcacattagacctgtatgatttgctgatgcggggtgatgcatcg
aacgacatgcgcctgcgctcaggtgatgtggtattcattccatctgttggtgggcttgtc
tcggtcgacggtgaagtccgacgcccggctatctacgagcttaaaggtaaagagtccatg
ggtgaggttatcgccatggctggtggtctcaaaggcgctgcctatccaagaagtagtagt
atcgagagatacaataagcaaggtttgaaaacgattaagaatgtcgatctgacagccgat
aaaggccgagctgtgatagccaaagctggcgacattgttaaagttaaaacggctacaact
caattcgaagatgcgattaccgtccttggtgcagtaattcgtccgggtaagtatcagtgg
tatcaaggtcaaagggtcagcgatctgctaccatcaatctggggcgatttccagccttct
gccgatctcgattatgcgattatcatcagagagatcaataagcacggtgatatagaggtg
catcaatttgcaccgtcgcaggcgattatcaccaaagcggctacagaagatttagagctc
agcccacgtgacatagtaatggtgtttaacttcagtgatgatgcacagaatcgattcgaa
ctcaataaactcgttagggaaagagtcgaaaaagttgtacaacttgtcggtgacagctct
ctttcgaaagatctattcaaagcaggtttttcccagttagaaaatcaaaaactgcgcaac
cgcagccaacttggtggcgtggtagtagctaaagagcaggtagaggatgacgaagcttta
gctataaaaggtgaagtcaacaggatgatggctaacctgtttgaagatcctgaactcatc
aaactcagtggtttgatgaaccgtagtgaactgctttatccaatcatcatgaagctaaat
catcagagccgttcgggcgatggtgtacaggtagttgccattaaggggcaggtctaccac
gagggtatgtatccactcgcagttaatgccagaatttcagaggctgttaaagcggcggga
ggactgaaagagggcgcctatacatccagagccgaactgactcgcaccgtcaccgttgca
gatggttcgaacatcacccaccaaaatatcgaactattagcggcattaaatggtgagcct
agctcaaacttgacattaaaaggccgagatatcctgactatcatgaccacgcctgagtgg
caggaaaacaagtcagtcgaaattcgtggtgaggttcgcttcccgggtgtctataacatt
cgccgtggtgaaacgcttaaagaagtcgttgagcgagcaggtggctttactaactttgct
tatcttccttcatcggtattcgttcgtgaatcggtccgtttgcaggaacagctggaaatt
aaaaagttagccgatcagcttcgacgggatatcgctactcgtggtgtctctaaagatggt
gatgttgtgaattacgccgatgcccagttgatgttaacggatctcgagaatatcgaagcc
gttggtcgtctcgttgttgacctttcagccatctcaattggcatcgaacaagctgatctt
cagttggaagattctgatgttctttacgtgccatcaaccaagcaaactatagcagtaatg
ggtgaagtgcagcacgcagcaactcacagatataaacaagggttaacactggatcagtat
ctgaatatgtcaggtggtgtgagagagagagccgacgatggcagaacttatgttgtgaaa
gctaatggctcagtgatgctacctagccgctcaatgtggtttagcagtgaagaccgttta
caaccgggtgacaccattattgtaccactggatacagaatacaaagataatttaaccctt
tggactcaggttaccagtatcatctataatacagccgttgcatttgcttcaatttctaat
attaaatag
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