Shewanella sediminis: Ssed_3111
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Entry
Ssed_3111 CDS
T00596
Name
(GenBank) transcriptional regulator, TetR family
KO
K18301
TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
Organism
sse
Shewanella sediminis
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sse03000
]
Ssed_3111
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
sse01504
]
Ssed_3111
Transcription factors [BR:
sse03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
Ssed_3111
Antimicrobial resistance genes [BR:
sse01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
Ssed_3111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_7
TetR_N
LacI
HTH_Tnp_1_2
HTH_22
HTH_3
FrhB_FdhB_C
HTH_23
HTH_28
Motif
Other DBs
NCBI-ProteinID:
ABV37715
UniProt:
A8FXZ2
LinkDB
All DBs
Position
complement(3749078..3749710)
Genome browser
AA seq
210 aa
AA seq
DB search
MTAELSCLNLSRSEQKRAQILEAAIELFCGHGFPNTSMDEVARKAGVSKQTVYSHFGCKD
GLFIASIKSKCVVSQLTDELFGDASEPERTLTNFGEYFGNMIVSPEAITVFTACVAQAET
HPEISALFFDAGPQHLLDMLSGYLEEVGKQGLYRFDKPRDCAVRLCLMMFGEMRMKLELG
LPIDDLIEGRSGYTQECVAMFLRAYRVANF
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccgaactctcctgtttaaacttgagtcgtagtgaacaaaaaagggcgcagatc
ctcgaggctgcgatagagctattttgcgggcatggttttcccaataccagtatggatgag
gttgccagaaaggccggcgtctcgaagcaaaccgtgtattcgcacttcggttgtaaagat
ggccttttcattgcttctatcaagtctaaatgtgttgtcagccagttaaccgatgagctg
tttggtgatgccagtgaaccggaaagaacactgactaattttggtgaatacttcggcaat
atgattgtgagtcctgaggcgataaccgtgtttactgcttgtgttgcacaagccgaaaca
catcctgaaatttctgcgctgtttttcgatgccggtccacagcatctgctcgatatgtta
tctggttatctggaagaggtgggtaagcagggtttataccgtttcgacaagcctcgtgat
tgtgcggtccgactctgtttgatgatgtttggtgagatgcgaatgaagctggagctggga
cttcctattgacgatttaattgaaggacgctctggttacactcaagagtgtgtggcaatg
tttttaagggcttatagggttgctaacttttaa
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