Shewanella sediminis: Ssed_3120
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Entry
Ssed_3120 CDS
T00596
Name
(GenBank) lytic transglycosylase, catalytic
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
sse
Shewanella sediminis
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sse01011
]
Ssed_3120
Enzymes [BR:
sse01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Ssed_3120
Peptidoglycan biosynthesis and degradation proteins [BR:
sse01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Ssed_3120
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SBP_bac_3
LPAM_1
Lysozyme_like
Phosphonate-bd
Motif
Other DBs
NCBI-ProteinID:
ABV37724
UniProt:
A8FY01
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All DBs
Position
3765424..3766866
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AA seq
480 aa
AA seq
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MKKLLFVLLTITLLASCQKVSVEQTKVIPEPIKKTTLNVGTLYGAQIFVTTGQGEAGFDF
EMASRFAEYLKLELKMKPYSNISELYQALESGEVDLLAAGLADTPTRREKFRLGPPLYRV
NQVLVYKQGTPIPKDVSTLEDNITVITDSSFVETLSQLQKLYPELVWEQEKEKDSEELMA
MIARGEITYTIADSSTFEINRRYLPELRAGPILKEKQAIVWLLPPKNSDQLMSDLLTFWH
YEKRSGTLAHLNEKYFAHVKRFDYVDTRAFLRAIDNKLPKYKESFQHYANGIDWRKLAAT
AYQESHWNPNARSPTGVRGLMMLTLPTAKQVGIKNRLDPIQSIKGGAKYLNDILNRLPDS
IPENQRMWFALASYNIGYGHVEDARKLAQSMGLNPSAWRDLKEVLPLLHKRKYYQRTRYG
YARGNEAVHYVDSIRRYYDTLVWVDNQNQLLIDEKASAEESQLAEKIGGKQENLSGAQPQ
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacttttgtttgtcttgctcactataaccttgctggcgtcttgccagaaggta
agtgtggaacaaacaaaggtgatacccgaaccaataaagaaaaccacacttaatgttgga
accctctatggtgcacaaatatttgtgactacagggcaaggtgaggccggattcgatttt
gagatggcgagtcgatttgctgaatatcttaaattagaacttaagatgaaaccttactcc
aatatcagcgagctttatcaagcgctcgagagtggtgaagtcgatctgcttgcagcagga
cttgccgataccccgactcgacgggagaaattccgcttaggcccacctctgtatcgggtt
aatcaggtcttggtctataagcaaggaaccccgatacctaaagatgtttcgacgctggaa
gataacattaccgttatcaccgactcctcttttgttgaaactctatctcaactgcaaaaa
ctctatcctgaactggtgtgggagcaggagaaagagaaagacagcgaagagctaatggcc
atgattgccagaggcgaaatcacctataccatcgccgactcgagcacctttgagatcaac
aggcgctacctgccagagttaagggccggccccattcttaaagagaaacaggcgatagtc
tggctattgccaccgaaaaacagcgatcaactcatgagtgatctgctcacattctggcac
tatgagaaacgctcgggcacccttgcacacctcaatgaaaagtatttcgcccatgtcaaa
cgcttcgattatgtcgatacccgtgcatttctcagggctatcgataacaagctaccgaaa
tataaggaaagttttcaacattatgccaatggtatcgactggcgaaagcttgccgccacc
gcttatcaggaatctcactggaatccgaatgcccgctcgccaaccggggtgagaggcttg
atgatgctgacacttccgacggcaaaacaggttggtataaaaaatcgactcgacccgata
cagagtatcaagggaggagcgaagtacctcaatgatattcttaaccggttacccgactct
atccctgaaaatcagcgaatgtggtttgccttagcctcctacaatatcggctatggacat
gtcgaagacgcgcgtaaactggcacaatcgatgggactgaatcccagcgcttggcgggat
ctgaaagaggtcctccccctgcttcacaaacgtaaatactatcaacgcacccgatacggc
tatgcccgtggtaatgaggccgttcactatgtcgatagtatcaggcgctattatgatacg
ttagtctgggtagataaccagaaccaactcttgatagatgaaaaagcatcggccgaagag
tctcagctcgctgagaaaatcggaggcaagcaagagaacctatcgggtgcccagccccaa
taa
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