Shewanella sediminis: Ssed_3130
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Entry
Ssed_3130 CDS
T00596
Name
(GenBank) prolyl-tRNA synthetase
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
sse
Shewanella sediminis
Pathway
sse00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Ssed_3130
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sse01007
]
Ssed_3130
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sse03016
]
Ssed_3130
Enzymes [BR:
sse01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
Ssed_3130
Amino acid related enzymes [BR:
sse01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
Ssed_3130
Transfer RNA biogenesis [BR:
sse03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Ssed_3130
Prokaryotic type
Ssed_3130
BRITE hierarchy
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GFIT
Motif
Pfam:
tRNA-synt_2b
tRNA_edit
HGTP_anticodon
Motif
Other DBs
NCBI-ProteinID:
ABV37734
UniProt:
A8FY11
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All DBs
Position
3777387..3779141
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AA seq
584 aa
AA seq
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MLKCRPIYFNNWISVMRVSKYLLSTQKETPADAEVISHQLMLRAGMIRRNASGLYSWLPT
GLRVLRKVEAIVREEMNKAGSVEILMPMVQPADLWVETGRFEKFGPELLRFQDRHNRDFV
LGPTHEEVITDIVRKEVNSYKQLPLNLFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHL
DQETMDETYETMFQAYNNILTRLGLAFRPVMADTGSIGGSMSHEFHVLANSGEDLIAYST
ESDYAANIEKAEAPMPTETRQAPALEMSLVNTPKAKTIAELVEHHGIAIEKTVKTLIVKG
ATEETPLVALVVRGDHELNEVKAEKIPAVLAPFEFADEADIRKAVGAGPGSIGPVGLEIP
VYIDHGVKVMSDFGAGANQDDKHYFGINWERDLPEAEAFDLRNIIEGEASPCGQGTIALL
RGIEVGHIFQLGKNYSEAMNANVLDHNGKAQTLLMGCYGVGVSRMVAAAIEQNHDDRGIT
WPDAIAPFRVGILPMNMHKSHRVKDMAEKLYQDMQDAGFEVLFDDRKERAGVMFADMELV
GLPHVVVIGDRNIDNGVFEYKNRRTGEKQEIPFDQIIDFLKSAK
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaatgtcgccctatttatttcaacaactggatatcggtaatgcgcgttagcaag
tacctgctttcaacacaaaaagagacccctgcagatgcagaggtgatcagtcatcaatta
atgttacgtgccggcatgatccgtcgtaacgcttcaggcctttacagctggttgccgaca
ggacttcgtgtgctgcgcaaggtagaagctatcgtccgtgaagagatgaataaagccggt
tctgttgaaatcctgatgcctatggttcagcctgctgatctttgggttgagacgggtcgc
ttcgaaaaatttggtcccgagctgcttcgtttccaggatcgccataaccgtgacttcgtt
cttggccctactcacgaagaggtgatcacggatatcgtgcgtaaagaggttaactcttat
aagcagttgccgctgaatctgttccagatccagactaagttccgcgatgaagtacgtcca
cgtttcggtgtgatgcgttcacgtgaattcttgatgaaagatgcttactctttccactta
gatcaagagaccatggacgagacctacgagacaatgttccaggcatataacaacattctg
actcgcttaggtttagcattccgcccggtaatggcagacacgggttctatcggtggcagc
atgtcacacgagttccatgtactggcgaacagcggcgaagacctgatcgcctactctacc
gagagcgattacgcggccaacatcgaaaaagccgaagcgcctatgccaactgagactcgt
caagcccctgcgcttgagatgagcctggttaacacaccaaaggctaagaccatcgccgag
ttggttgagcatcacggcatcgccatcgaaaagacggttaagacccttatcgttaaaggt
gcaaccgaagaaacacctctggtcgccctcgttgttcgtggcgatcatgagcttaacgaa
gtcaaggccgagaagatccctgcggtactggctccgtttgagtttgcagacgaagccgat
attcgtaaggctgttggtgcaggccctggttctatcggtcctgttggcctcgagatccct
gtctatatcgaccacggcgttaaagtgatgagcgatttcggcgcaggtgcaaaccaagat
gataagcactacttcggcatcaactgggaacgcgatcttccagaggctgaagcattcgat
ctgcgtaacatcatcgaaggcgaagccagtccttgtggtcaaggtactattgctctactt
cgcggtatcgaagtgggtcatatcttccagctgggtaaaaactactctgaggcgatgaac
gctaacgttctcgaccacaatggtaaggcgcaaaccctgttgatgggttgctatggcgtg
ggcgttagccgcatggttgccgctgcgattgagcagaaccacgatgaccgtggtatcacc
tggccggatgctattgctccattcagagtgggtatcttaccgatgaacatgcataagtct
catcgtgttaaagatatggctgaaaagctctatcaagacatgcaggacgcaggtttcgaa
gtactgttcgatgaccgtaaagagcgtgccggtgtgatgtttgccgatatggaacttgtc
ggtctgccgcacgttgtcgtgattggcgaccgtaatatcgataacggtgtgttcgagtat
aagaaccgccgcacgggtgagaagcaagagatcccattcgatcaaattatcgacttcctt
aagtcagctaagtaa
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