Shewanella sediminis: Ssed_3133
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Entry
Ssed_3133 CDS
T00596
Name
(GenBank) putative branched-chain amino acid ABC transporter
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
sse
Shewanella sediminis
Pathway
sse02010
ABC transporters
sse02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Ssed_3133
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Ssed_3133
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sse02000
]
Ssed_3133
Transporters [BR:
sse02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Ssed_3133
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
Motif
Other DBs
NCBI-ProteinID:
ABV37737
UniProt:
A8FY14
LinkDB
All DBs
Position
complement(3781401..3782648)
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AA seq
415 aa
AA seq
DB search
MYKKLIIASSIASGVFGISSQANAEETIFVGHLADMSGPTAFVGKPYADGVRDSLAYINS
HGGISGTKLEYETIDYAYKVPQAIASYKKWQSRKNMVAMQGWGTADTEALISFAAKDQTP
VFSASYSGHLTDPKGLNPNTKKPAPYNFFYGASYSDSCRGLVQWAAKDWQAKGAKGKPKF
THIGANHPFPNAPKAACAEYATELGFEVQPAVVISMKPGDFKAQCLSLKSSGTNYGYIGN
LGGSVQSLIKSCNTVGTEIQFMSNIWGGDKLVFKAAGEGIKDYIFPTMTPFWTDEVPGMK
LVREISKMSDSSGSEERLHHYIRGVCSTFFMKESMEWAKANGGVTGENVKKGMYAQKNWV
PKGLEGVCLAATWTPEDHRGINQVNIYKGNFNGGDIRVEKADQVTLERRVDWLGY
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtataaaaaattgattatcgcctcttctatcgcaagcggtgtgtttggcatcagtagt
caggccaatgccgaagagactatcttcgtcggtcatcttgccgatatgtcaggcccaacc
gctttcgtgggtaaaccctatgccgatggtgtgagagactcactcgcctacatcaactcc
catggaggcataagcgggactaagctcgaatatgagacgatagattatgcctacaaggtg
cctcaggctatcgcctcatataagaagtggcagtcacgtaagaatatggtcgcgatgcag
gggtggggaaccgccgataccgaggcacttatctcctttgccgctaaagatcagacgcct
gtcttctccgcctcttattcgggtcacctgaccgatcctaaggggctaaatcccaacacc
aagaaacctgcaccctataacttcttctatggggcgtcctactccgactcctgtcgtggt
ctggttcagtgggccgccaaagactggcaggccaaaggggccaagggcaagccaaagttt
acccatattggtgctaatcaccccttcccgaatgcgcctaaggcggcttgtgccgagtat
gcgaccgagcttggatttgaagtacagccagccgtcgttatctccatgaagcccggagac
tttaaggcgcagtgcctgagcctgaaaagctcgggaactaactatggctatatcggtaac
ttaggtggctcggtacagtcactgattaaatcctgtaatacggtcggcaccgagatccag
tttatgtccaatatctggggcggtgacaagctggtatttaaagcggcaggcgaggggatt
aaagattatatcttcccgaccatgacgccattttggaccgatgaagtgccgggtatgaag
ctggtgcgtgagatctcgaagatgtctgacagctcaggcagtgaagagcgtctgcaccat
tacattcgcggggtctgctcaaccttcttcatgaaagaatcgatggagtgggccaaggca
aacggcggtgtgaccggtgagaatgttaaaaaaggcatgtatgcccagaaaaactgggta
cctaagggactcgaaggagtgtgtttggcagcgacctggactccggaagatcaccgtggc
atcaaccaggtgaatatctataaggggaatttcaacggcggtgatattcgcgtcgagaag
gccgatcaggtgaccctcgaacgtcgtgttgactggttagggtattaa
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